Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_031939.1 Length=89817 Score E Sequences producing significant alignments: (Bits) Value seq122 82.4 4e-11 >seq122 Length=4874392 Score = 82.4 bits (90), Expect = 4e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 73620 ATCTTTGGAGGGACTATCAACTCTAAAGGTTTTAAGGTACTGGATGAGCACATTGGCCTT 73679 ||||| || || || |||| | | || | ||||| ||||| |||| | || || Sbjct 3983534 ATCTTCGGCGGCACGGTCAATGCCAGGGGCTACAAGGTGCTGGACCCGCACGTGGGTCTG 3983475 Query 73680 ATTTATGGTGACTCTATCACGTTGGAACGTGCAAACGAAATCCTGAAACGTTTGTATGAA 73739 || || || ||||| || || | || ||||| || | ||||||| ||| || | | Sbjct 3983474 ATCTACGGCGACTCGATTACCCTCGAGCGTGCCAATCAGATCCTGAGTCGTCTGGAGGCC 3983415 Query 73740 ATGGGTTTTGCAAGCTCTAACGTAGTATTTGGTGTAGGCTCTTACACTTACCAGTATATG 73799 | || ||||| ||| || || || || || || || ||||| || |||||||| | Sbjct 3983414 AAAGGCTTTGCCAGCAGCAATGTGGTGTTCGGCGTCGGGTCTTATACGTACCAGTACAAC 3983355 Query 73800 ACTCGTGACACCTTTGCATTTGCTGTTAAAGCAAC 73834 || ||||||||||||| || || | ||||| || Sbjct 3983354 ACGCGTGACACCTTTGGTTTCGCCATGAAAGCGAC 3983320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 287267671095054