Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value seq154 89.7 1e-13 >seq154 Length=560718 Score = 89.7 bits (98), Expect = 1e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 35052 TGAAAGCGATGGCGAAAGACCTGAAAACTCCAGTTATCTCATTAAGCCAGCTCTCCCGCG 35111 ||||||| |||||||||| ||||| ||||| || | ||| ||||| |||| Sbjct 275553 TGAAAGCCTTGGCGAAAGAACTGAATGTACCAGTGGTCGCCTTATCACAGCTTAACCGCT 275494 Query 35112 ATGTTGAGAAGCGGCCAAACAAGCGCCCGACAAACGCAGATTTGCGTGATTCAGGAAGCA 35171 | ||| |||| || | || || || ||| ||||||||||||| |||||| | Sbjct 275493 CATTGGAGCAGCGCGCAGATAAACGGCCAGTCAACTCAGATTTGCGTGAGTCAGGATCGA 275434 Query 35172 TTGAACAGGACGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATGACGAGAACA 35231 |||| ||||| || |||| ||||| | ||||||| || | ||| ||| |||| |||| Sbjct 275433 TTGAGCAGGATGCCGACTTGATCATGTTTATCTATCGTGACGAGGTGTATCACGAAAACA 275374 Query 35232 GT 35233 || Sbjct 275373 GT 275372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129286383852430