Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2150 122 1e-22 >seq2150 Length=3231181 Score = 122 bits (134), Expect = 1e-22 Identities = 351/530 (66%), Gaps = 10/530 (2%) Strand=Plus/Minus Query 145682 TCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCC 145741 ||||||| ||||| ||||| || |||| ||| | || || ||||||||| || | Sbjct 2912439 TCAGGGGTTCCACATGGTTCAGATAGATGTGGGTATCTCCGGTTGTGTGGATGAACTCTC 2912380 Query 145742 CGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGT 145801 | | | || |||| |||||||| |||| ||| || || | || ||||||| Sbjct 2912379 CCGTTTTCAGATCCGTATAGTGGGCGATGATGTGGGTGAGTAGAGCATACGATGCTATGT 2912320 Query 145802 TGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCC 145861 |||| || || || || || ||||| | || || ||||||||||| || || |||| Sbjct 2912319 TGAATGGAACTCCTAGACCAATGTCGGCGCTCCGTTGATACAGCTGGCACGATAGTTCCC 2912260 Query 145862 CGCCCGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGG 145920 || | || ||||| ||||| ||| || |||||| || || || |||||| || ||| Sbjct 2912259 CGTCAGCGACGTAAAACTGTGCA-AGACAGTGGCAAGGAGGTAGTGCCATGCTCGGGAGG 2912201 Query 145921 TCCGCCGGGTTCCAGGCGGTGAGGA-CGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCT 145978 || ||||| || | ||||| | ||| || | || | ||| | || || Sbjct 2912200 TCTTTGACATTCCAAGCAGAGAGGATCAAGCGTC--GGTCATTGGGATCTTTCCGTATAG 2912143 Query 145979 CCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCA 146038 | | |||| | |||| ||||| ||| || ||| |||||| || | ||| | Sbjct 2912142 CTTCAATCAACTGGCTGACTTGGTCGGTGCCTTGACCCGTGTAATCGGTGTGCATGTCAA 2912083 Query 146039 CGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCT 146098 ||| | ||| ||||| |||| ||| ||||| ||||| || ||||| || || || || Sbjct 2912082 TGTAAGTGGCTCCGAAATGCCGCCATTGGAAGCCGTAAACAGGCCCGAGATCACCTTCCT 2912023 Query 146099 CCCTGTGCC--CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156 | | | ||| | ||| | | | || || | || || || || ||||||||||| Sbjct 2912022 CGC-GAGCCGAGAAACCCAG-TTTGTCCAGAAACGCTCGAGAGCCATTAGCGTCCCAGAT 2911965 Query 146157 CTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGA 146206 | |||| |||| || | ||| || | | ||||| ||||||| || Sbjct 2911964 CGTGACATTTTTCGCTGATAACTCCTTCGCATTGGTGGAGCCCCTGAGGA 2911915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590060491752440