Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2150 98.7 8e-16 >seq2150 Length=3231181 Score = 98.7 bits (108), Expect = 8e-16 Identities = 168/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 20924 CAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCC 20983 |||||| || || ||||| || | ||||| || || ||||| | || ||||| Sbjct 2912438 CAGGGGTTCCACATGGTTCAGATAGATGTGGGTATCTCCGGTTGTGTGGATGAACTCTCC 2912379 Query 20984 CGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043 || |||| |||| ||| ||||| | | || || || || || || ||||| Sbjct 2912378 CGTTTTCAGATCCGTATAGTGGGCGATGATGTGGGTGAGTAGAGCATACGATGCTATGTT 2912319 Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCC 21103 || || || || || || ||||||||| || || ||||||||||| || || ||||| Sbjct 2912318 GAATGGAACTCCTAGACCAATGTCGGCGCTCCGTTGATACAGCTGGCACGATAGTTCCCC 2912259 Query 21104 CCGAGCCACGTAAAACTGACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGT 21162 ||| ||||||||||| ||| || ||| |||||||| || ||||| | || ||||| Sbjct 2912258 GTCAGCGACGTAAAACTG-TGCAAGACAGTGGCAAGGAGGTAGTGCCATGCTCGGGAGGT 2912200 Query 21163 C 21163 | Sbjct 2912199 C 2912199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427764472907280