Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq614 338 9e-88 seq946 161 1e-34 >seq614 Length=536467 Score = 338 bits (374), Expect = 9e-88 Identities = 1206/1869 (65%), Gaps = 16/1869 (1%) Strand=Plus/Plus Query 78709 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 78768 ||||| | ||||| ||||| | || ||||| ||||| | | |||||||| || Sbjct 529848 TTGTCGACAGTGAACTGAATCGCCTGGGCGGCGGGCTTCGTTCTCAAGTAGTACATCCCG 529907 Query 78769 GTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGA 78828 ||||| | |||||| |||| |||||||||||||| ||| || || | | | Sbjct 529908 GTTTTCAAACCGAGTTTCCAGCCGTAGAAATGCATCGACGTGAGCTTCCCGAAGTTGGTC 529967 Query 78829 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 78888 || || | ||||| |||| |||||| || ||||||||||| || || | ||| || ||| Sbjct 529968 TCGGCGAAGTGGATGTTCAGAGATTGGCTCTGATCGATGAACGCCCCACGGTCAGCCGCC 530027 Query 78889 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 78948 ||||| ||||| |||| || || | |||||||| || || | | | || | | Sbjct 530028 ATTTTGATGATGTTCTTCTGAGGCAGTTCCCAAACGGTCCGGTAGAGTTGTTTCAATTTA 530087 Query 78949 TCTGGAAGGTTTGTATTCTGAATGGATCCACCAT--CT-GCCATAATCCTATTCTTGATC 79005 || || | | |||||| | ||| ||| | || || | || | ||||| ||| Sbjct 530088 TCAGGGATATCAAGATTCTGCACGGA---ACCGTTGCTAGCGACAAGCTCGTTCTTCATC 530144 Query 79006 TCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 79065 ||| ||||| | ||||| | | | | ||||| || |||| || | ||| Sbjct 530145 GTTTCGTTCCAGAGGCCCAAGTCGGTGAGATCCTTCAGGAGGTGGTGATTGACGATTTGG 530204 Query 79066 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCA 79125 ||||| || || | |||| | | || | || || || || || || | || || Sbjct 530205 AATTCACCGGAGAGAACTCGTCTGGCATACACGTTGCTCGTGTACGGCTCAATGGACTCG 530264 Query 79126 TTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTT 79185 || || || | || ||||| |||||||| || ||||| || |||| || | |||||| Sbjct 530265 TTGTTGCCGAGGATCTGAGCCGTTGATGCTGTGGGCATGGGCGCCAGCAGCAGACTATTC 530324 Query 79186 CTAAGACCGTA-TGATCTGATTTTATCTTTTA-GAGATTCCCAATCCCAAAGATCAGACG 79243 | | |||| || | |||||| ||| | || ||||| ||||| || || || | Sbjct 530325 CGGATTCCGTGCTGGGC-GATTTT-TCTCCGAAGACCGTCCCAGTCCCAGAGGTCGGATG 530382 Query 79244 GGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATG 79303 | |||||||| | |||| || ||||| || || || | || | ||||| Sbjct 530383 GCTTGACATTCCACATGTCATGCTGCAGAATCCCCTTTGAGACGGGGCAGCCGGCGTATG 530442 Query 79304 TTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAA 79363 | || || | ||| | |||| || | || || || || || || || || |||| | Sbjct 530443 TCTCGTAGGTTCCGTGGATTTCCGCGAGCTCGCAGCTTGCTTCCAACGCAGCGAAATAGA 530502 Query 79364 TGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTA 79423 |||||||||| || || | || ||||| ||||| |||| || || ||||| | Sbjct 530503 TGGTTTCGAAGATTTTGCTGTTCAGATCCATCGCTTCCGGGCTGTCGAAAGGATACCGCA 530562 Query 79424 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 79483 || || ||||| || || | || || ||||| || ||||| |||| ||||||||| | Sbjct 530563 TCAGGATGAACGCATCGGCCAGACCCTGGACACCGATTCCGATCGGTCGATGTCTCTTGT 530622 Query 79484 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC 79543 | ||| ||||| || | ||||| || || || || || ||||| ||||| || | Sbjct 530623 TGCTTCGTTCGGCTTCCGGCACGGGATAGTAGTTGATGTCGATGATTTTGTTGAGGTTTC 530682 Query 79544 TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATC-AAATCGTCCATCTATTACA 79602 || ||||| ||| || | | | | || || ||| || || || || Sbjct 530683 GCGTGATGGCTTTGGTCACTTCTCTCAATCTCTCGAAGTCGAAAGCG-CCGTCGTGCACG 530741 Query 79603 AACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATAT 79662 || ||| | || || || |||| || || || || | ||| | | || || Sbjct 530742 AAGCGGTTGAGGGCCACCGAAGCCAAGTTGCAGACCGCGATCTCGTCTGGCGACGAGTAC 530801 Query 79663 TGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTC 79722 | | ||||| ||||| || || ||||| ||||| || | ||| ||||| || ||| Sbjct 530802 TCGACGATTTCTGTGCAAAGATTCGAGCACTTGATGGTCCCGAGATTCTGTTGGTTGCTC 530861 Query 79723 TTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCT 79782 || ||| || || ||||| || || ||| |||| || || ||||| |||||| ||| Sbjct 530862 TTGCGGTTGCAAGCGTCCTTGTACAGCATGTACGGGGTCCCGGTTTCGATCTGACTTTCC 530921 Query 79783 ATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACT-TGTATCTCTTTTCTCTTTC 79841 | |||| | ||| | | || | | | | | | |||| | ||| | || Sbjct 530922 AGGATCGTATACCACA-GTTTCTGGGCGTCGATCTGGCGGATGTAACGGCCTTCCTTCTC 530980 Query 79842 GTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTC 79901 || || | | ||||||||||| ||||| || | || || || Sbjct 530981 ATAGCCCTCGTAGAGTTTCTCGAACTCGTCGCCCCACGTGTCACTGAGGCCCGGGCACGT 531040 Query 79902 GTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGG 79961 | |||||||| | |||||||| || | | | || |||||||| || || || || Sbjct 531041 ATTGGGACACATGAGCGACCACTTGCCGTTTTGTTCAACGCGTTTCATGAACAGGTCCGG 531100 Query 79962 AATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTT 80021 |||||| || || || || || | || | ||| ||| | || || || || Sbjct 531101 AATCCACAGGGCGTAGAAGAGGTCGCGGGCACGCATCTCTTCGATGCCAGTGTTTTTACG 531160 Query 80022 AAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCC 80081 ||||| | |||| | | |||||| |||||||| || | || ||||| | | | || Sbjct 531161 GAGATCCAAGAACTCGAAAATATCGCCGTGCCACGGCTCGAGATAGATGGCGAAAGCGCC 531220 Query 80082 CGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACAT 80141 ||||||||||| || ||||| || | ||| | ||||||||| || |||||| || ||| Sbjct 531221 GGGTCGTTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAAACTCGCAGCAT 531280 Query 80142 TGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 80201 |||| ||||| || || || || || ||||||| ||| || || | | ||||| Sbjct 531281 GGGAACGATACCGTTCGACGTCCCGTTCGTCCCGGCGATGTAAGAGCCCGTAGGTCGAAT 531340 Query 80202 ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 80261 | || || ||| || || || || ||| ||||| | |||||| | | | Sbjct 531341 GCAATGGATGTTTACACCAATACCACCGGCGGATTTCGAGATCAGAGCGCATTGGCTCAG 531400 Query 80262 CGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACAT 80321 ||| || ||||| || || || |||||| |||| | || || |||||| || Sbjct 531401 CGTTTCGTAGATCCCTTCGATAGAATCATCCTTCATTGTCAGCAGGAAACAGGAGCTCAA 531460 Query 80322 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 80381 || | || | ||| ||||| || || | || ||| ||||| || |||||||| || Sbjct 531461 CTGTGGGCGGCAAGTACCCGCGTTGAACAGCGTCGGACTGGCGTGGGTGAACCATTTCTC 531520 Query 80382 AGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCG 80440 || | ||||| ||||| || || | || | || || | |||||||| |||| Sbjct 531521 GCTCATGAAGTTGTAGGTCTCGATGGCGGCCTCCACGTCGTCACCG-TGAATTCCGACCG 531579 Query 80441 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGT 80500 || ||||| | ||||||||||||||| || ||||| || | ||||| | | || Sbjct 531580 AAACGCGCATCAGCATGTGCTGAGGTCTCTCGACGATTTTACCGTCGATTTTTAGGAGGT 531639 Query 80501 AAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 80560 | ||| || | ||| || || || |||||||| ||||| | ||||| | | Sbjct 531640 AGGATCGCTCGAGGGTTCGGAATCCGAAGTAGTTGTAGTTGAAGTCCCTATCGTAGACTA 531699 Query 80561 TAACCGAGT 80569 | |||||| Sbjct 531700 TTGCCGAGT 531708 >seq946 Length=1044653 Score = 161 bits (178), Expect = 1e-34 Identities = 446/679 (66%), Gaps = 15/679 (2%) Strand=Plus/Minus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 ||| ||||| ||| ||||| || || || ||||| ||||| || || || || || || Sbjct 24374 CATTACTCCGGCTTTCTGGTACTCGCCGACGCGTTTCTCGAAGAAGTTCGTCTTCCCCTC 24315 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775 ||| || || | |||||||||||||| ||||| | || | | || | | | Sbjct 24314 CAACGAGATTTGCTCCATGAAATCAAATGGATTCTGACTGTTCCACAACTTGTCGCACTC 24255 Query 49776 CAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 49835 | ||| | || || ||| |||||||||||||| ||| |||||| | |||||||| Sbjct 24254 GAGCTCAACCAACAGTCGATCGGCGACAAATTCTATGTATTGTTTCATGAGATCACAATT 24195 Query 49836 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 49895 ||| || | | || | ||| | || || || || || || || | || || Sbjct 24194 CATACCGAGCATCGCGCACGGTAAAGCTTCGGTGAGGAACTCCTGCTCGATCGCAACGGC 24135 Query 49896 ATC-----TGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTA 49950 | || | | ||||||| || | || | |||| || | ||| ||| | Sbjct 24134 GTTGCGGATGATCTCATAGATC---CGCT--CTACGGACGGTTTCTGGACTAAGTGTCTG 24080 Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 ||||| | || ||||||||| || || ||||||||||| |||||| ||||| Sbjct 24079 AACATAAGGCAAGCGAAATCGGTATGGAGGCCCTCGTCTCTCGAAATTAGCTCGTTACTG 24020 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || | ||||||||| || || || || || ||||| ||||| || || || | ||| Sbjct 24019 AAAGTCAATCCGGGCATCAGACCGCGTTTCTTGAGCCAGAATATCGAAGCGAACGCTCCA 23960 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 ||||| || ||||| || || || || || || | | ||||| || | || | Sbjct 23959 CTGAAGAAAATCCCTTCGACCGCCGCGAACGCCACGACACGTTCTCCGTAGGTAGCATTC 23900 Query 50131 TCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 | || ||||| || | |||||||| || ||||| || | || ||||| || || Sbjct 23899 TGATTCCCGATCCAATTCAGGGCCCAATCAGCTTTCTTCTTGATGCATGGCATGGTCTCG 23840 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247 ||||| | || |||| | ||| | ||| | | || |||| || || | | Sbjct 23839 ATGGCCCTGAATAGATGATCACGTTCCATCGGATCCGTGATGTAGGTATTGAGCAGCA-A 23781 Query 50248 CTA-TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 50306 | | |||||||||||||||||||| || || | || || |||||||| || | ||| Sbjct 23780 CGAGTACATTTCCGAATGAATGTTCTCCATCATGACTTGGAAGCCGTAGAAGCAGCGAGC 23721 Query 50307 CTCGGTAATCTGCACTTCT 50325 || || | ||| || ||| Sbjct 23720 TTCCGTGACCTGAACCTCT 23702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718248948846040