Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq743 100 3e-16 >seq743 Length=1761 Score = 100 bits (110), Expect = 3e-16 Identities = 114/152 (75%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 6479 AGAGCTTCACCAAAACAAACTGCTTTCGCTGCGATAACATGAAGAAGCGGGCCGCCTTGA 6538 || || || || ||| ||| || || || || |||||||| | || |||||||| ||| Sbjct 1610 AGCGCCTCCCCGAAAGCAACAGCCTTGGCGGCTATAACATGCATGAGGGGGCCGCCCTGA 1669 Query 6539 ATACCCGGGAAGATAGCAGAATTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATG 6598 | |||||||||| |||||| || ||||| ||| | | || ||||||| ||||| | Sbjct 1670 AGCCCCGGGAAGACAGCAGAGTTAACTTTTTTG-CAAGGTCTTCATCGTTGGTAAGCACA 1728 Query 6599 AGGCCACCACGAGGGCCGCGCAAAGTTTTATG 6630 | |||||| || || || ||||||||||| || Sbjct 1729 ATGCCACCGCGCGGACCACGCAAAGTTTTGTG 1760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555347851149560