Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq946 87.8 2e-12 >seq946 Length=1044653 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 21157 ATCTTCtttttttGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAA 21216 ||||||||| || | ||| | ||| ||| || || || | || | ||| ||||| || Sbjct 24389 ATCTTCTTTGTTGGCCATTACTCCGGCTTTCTGGTACTCGCCGACGCGTTTCTCGAAGAA 24330 Query 21217 ATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAA 21276 || ||||| || ||||| || || ||||| |||||||||||||| | | || | Sbjct 24329 GTTCGTCTTCCCCTCCAACGAGATTTGCTCCATGAAATCAAATGGATTCTGACTGTTCCA 24270 Query 21277 TATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACA 21336 | || | || | || || || | || ||| || ||||||||||| ||||| Sbjct 24269 CAACTTGTCGCACTCGAGCTCAACCAACAGTCGATCGGCGACAAATTCTATGTATTGTTT 24210 Query 21337 CATTAATTCACAATTCATACCGATCA 21362 ||| | |||||||||||||||| || Sbjct 24209 CATGAGATCACAATTCATACCGAGCA 24184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531886099591640