Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq2156 87.8 2e-12 >seq2156 Length=2198910 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| |||||||| ||||||||||| |||||||| || ||| |||| ||| || Sbjct 1776404 AATGCAGATTTTTGTGAAAACGCTCACCGGAAAAACAATCACCCTCGAGGTCGAGCCCTC 1776463 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | | | || || || ||| || || ||||| | || |||||| Sbjct 1776464 CGACACCATCGAAAACGTCAAGGCCAAGATTCAGGACAAGGAAGGAATTCCGCCTGATCA 1776523 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || |||| || | || ||||||||| | ||||| | |||| | ||||||| || Sbjct 1776524 ACAGCGACTGATCTTCGCCGGCAAACAACTCGAAGAAGGACGAACCCTCTCCGATTACAA 1776583 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||| || || || || || | || ||||| Sbjct 1776584 CATCCAGAAGGAATCGACGCTTCACCTGGTG 1776614 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/197 (70%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| |||||||| | |||||||||||||| || ||||| || || Sbjct 1778168 ATGCAGATTTTCGTCAAAACCTTGACGGGAAAAACCATCACTCTCGAAGTAGAAGCCTCT 1778227 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | || || ||||| || || ||||| ||||| || ||| Sbjct 1778228 GACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAGGAAGGAATCCCC-CCGACCAG 1778286 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| || ||||||||| | ||||| | | ||| || | ||||| ||| Sbjct 1778287 CAACGTCTTATTTTCGCTGGCAAACAACTCGAAGACGGCCGTACCTTGTCGGATTACAAC 1778346 Query 115466 ATTCAAAAAGAGTCTAC 115482 || || ||||| ||||| Sbjct 1778347 ATCCAGAAAGAATCTAC 1778363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425332538441320