Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq664 217 7e-52 >seq664 Length=3545 Score = 217 bits (240), Expect = 7e-52 Identities = 465/687 (68%), Gaps = 11/687 (2%) Strand=Plus/Minus Query 65919 ACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTA 65978 ||||||||| | | |||||| ||| || |||||||| || | || | || || | Sbjct 2021 ACCGGCTCGCTTGGGCTGGACATCGCGCTGGGCATCGGCGGCTTGCCCCGCGGTCGTATC 1962 Query 65979 GTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCC 66038 | || | ||||| ||||| || || || | || ||| || || ||| | ||| Sbjct 1961 ATCGAAGTTTACGGCCCTGAAAGCTCTGGAAAAACCACTTTGGCGCTGCATGCGATTGCC 1902 Query 66039 AATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCT 66098 | || ||||| || |||| ||| | |||||||| || || | || || || Sbjct 1901 GAAGCTCAGAAAAAAGGCGGCATTTGCGCTTTTATCGACGCAGAGCACGCCCTTGATCCA 1842 Query 66099 GAGTACGCCGCGGC-GCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACAC 66157 | || || ||| ||| || || |||||||| |||||| | | ||||| || | Sbjct 1841 GGATATGC-GCGTAAGCTTGGCGTTGATGTCGATAATCTCCTCCTCAGTCAGCCGGATGC 1783 Query 66158 TGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCAT 66217 || |||||||| || ||||| | ||| ||| || ||| ||| ||| | || | Sbjct 1782 GGGTGAGCAGGCGCTTGAGATTGCCGACACTCTTGTTCGGTCCGGCTCGGTAGACGTCCT 1723 Query 66218 CGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGA 66277 ||| || || || || || || || ||||||||||| ||||| || || || || || || Sbjct 1722 CGTCGTTGATTCGGTTGCCGCGCTTGTGCCGCGGGCAGAGCTTGAGGGCGATATGGGTGA 1663 Query 66278 CTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCAC 66337 | || ||||||||||||||||| |||||| |||||| ||||||||||||||||||| Sbjct 1662 CAGCCATGTCGGCCTGCATGCCCGTCTGATGAGTCAGGCATTGCGCAAGCTGACCGGCAC 1603 Query 66338 GATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGC-- 66395 | || | |||||||| | | | | | || ||| | ||| ||| |||||| Sbjct 1602 CGTGTCCCGGTCCAACACGATGGTCATTTTTCTAAACCAGATCCGCATGAAAATCGGCGT 1543 Query 66396 AACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCC 66455 | || | || ||| ||| || || || || ||||| || || ||||| ||| Sbjct 1542 GATGTTTGGTA--ACCC---TGAAACTACGACAGGCGGTAACGCGCTCAAATTCTATGCC 1488 Query 66456 TCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC-GG 66514 || ||||| | || |||||||||| | | ||||| |||| |||| || | || Sbjct 1487 TCTGTGCGCCTCGACATCCGCAGGATTGGAGCAATCAAGGAGCGCGACGAGG-TGACGGG 1429 Query 66515 CAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGA 66574 ||||| || ||||||||||||||||| ||||| |||| || || | |||| ||| Sbjct 1428 CAACCAGACCCGCGTGAAGGTTGTCAAAAACAAAATGGCACCGCCCTTCAAGCAGGTTGA 1369 Query 66575 GTTTTCCATCGTCTACGGCGAGGGCAT 66601 ||| |||| | || || || ||||| Sbjct 1368 GTTCGACATCATGTATGGTGAAGGCAT 1342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242463866256212