Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq614 253 2e-62 >seq614 Length=536467 Score = 253 bits (280), Expect = 2e-62 Identities = 1033/1612 (64%), Gaps = 52/1612 (3%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | ||| ||| || ||| || |||||||| || || || || Sbjct 531679 AACTACAACTACTTCGGATTCCGAACCCTCGAGCGATCCTACCTCCTAAAAATCGACGGT 531620 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | |||| |||| || || ||||||||||||| | |||| |||||||| || Sbjct 531619 AAAATCGTCGAGAGACCTCAGCACATGCTGATGCGCGTTTCGGTCGGAATTCACGGTGAC 531560 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||| || | | | | | | || |||| | || || ||| ||| ||| Sbjct 531559 GACGTGGAGGCCGCCATCGAGACCTACAACTTCATGAGCGAGAAATGGTTCACCCACGCC 531500 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACC--CCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | ||||| |||||||||||||| || ||| |||||| || || ||||||||| Sbjct 531499 AGTCCGACGCTGTTCAACGCGGGTACTTGCCGC--CCACAGTTGAGCTCCTGTTTCCTGC 531442 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 |||| | |||| || || ||| || || | ||| | || | | || || | Sbjct 531441 TGACAATGAAGGATGATTCTATCGAAGGGATCTACGAAACGCTGAGCCAATGCGCTCTGA 531382 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| |||| ||| || || || || | | |||| | | || | | ||| || | Sbjct 531381 TCTCGAAATCCGCCGGTGGTATTGGTGTAAACATCCATTGCATTCGACCTACGGGCTCTT 531322 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 ||||| ||| || || || || || ||||| |||| || ||||| || || ||||||| Sbjct 531321 ACATCGCCGGGACGAACGGGACGTCGAACGGTATCGTTCCCATGCTGCGAGTTTTCAACA 531262 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || |||||||| |||||||| || | | || ||||||| |||||| Sbjct 531261 ACACCGCTCGCTACGTCGACCAGGGCGGCAACAAACGACCCGGCGCTTTCGCCATCTATC 531202 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 ||||||| ||||||| || | | ||| | || || || || ||| |||| || Sbjct 531201 TCGAGCCGTGGCACGGCGATATTTTCGAGTTCTTGGATCTCCGTAAAAACACTGGCATCG 531142 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | | | ||| | |||||||||||||| || ||| | || ||||| || ||||||| Sbjct 531141 AAGAGATGCGTGCCCGCGACCTCTTCTACGCCCTGTGGATTCCGGACCTGTTCATGAAAC 531082 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT--GTC 94370 |||| || ||||| | ||| || | ||||||||| || || || || || Sbjct 531081 GCGTTGAACAAAACGGCAAGTGGTCGCTCATGTGTCCCAATACGTGCCCGGGCCTCAGTG 531022 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 |||| | || || | || || | | || | | || || | ||| ||||| Sbjct 531021 ACACGTGGGGCGA-CGAG-TTCGAGAAACTCTACGAGGGCTATGA---GAAGG--AAGGC 530969 Query 94431 CAGGAAGGT------TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGT 94484 | | | | || || || ||| |||||| || |||| |||| ||| | Sbjct 530968 C-GTTACATCCGCCAGATCGACGCCCAGAAACTGTGGTATACGATCCTGGAAAGTCAGAT 530910 Query 94485 GGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCA 94544 || || || || || ||||| ||| ||||||| || |||| |||| |||||| || Sbjct 530909 CGAAACCGGGACCCCGTACATGCTGTACAAGGACGCTTGCAACCGCAAGAGCAACCAACA 530850 Query 94545 GCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCC 94604 | | |||||| |||||| |||||||||| ||||| || || |||||||| | || || Sbjct 530849 GAATCTCGGGACCATCAAGTGCTCGAATCTTTGCACAGAAATCGTCGAGTACTCGTCGCC 530790 Query 94605 GGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGC 94664 |||||||| || || || ||| ||| || | ||| | ||||||| || | Sbjct 530789 AGACGAGATCGCGGTCTGCAACTTGGCTTCGGTGGCCCTCAACCGCTTCGTGCACGACG- 530731 Query 94665 CTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAA--CTTCGCGGGAAGGATG 94722 || | | ||||| ||| ||| || || | || || || Sbjct 530730 ----GCGCTTTCGACTTCGAGAGATTGAGAGAAGTGACCAAAGCCATCACGCGA------ 530681 Query 94723 GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGA--GA 94780 ||||| |||| | ||||||| |||| ||| ||||| ||||| || || || Sbjct 530680 ------AACCTCAACAAAATCATCGACATCAACTACTATCCCGTGCCGGAAGCCGAACGA 530627 Query 94781 ACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGG 94840 | ||| || ||||| || ||||| ||||| ||||||||| | || || ||| | Sbjct 530626 A--GCAACAAGAGACATCGACCGATCGGAATCGGTGTCCAGGGTCTGGCCGATGCGTTCA 530569 Query 94841 TGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCG 94900 | ||||||| || | |||| || ||| || | |||| || || |||| Sbjct 530568 TCCTGATGCGGTATCCTTTCGACAGCCCGGAAGCGATGGATCTGAACAGCAAAATCTTCG 530509 Query 94901 AAAGCATTTATTACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGG 94959 ||| ||| |||| || || | ||| ||| | | || | | || | ||| Sbjct 530508 AAACCATCTATTTCGCTGCGTTGGAAGCAAGCTGCGAGCTCGCGGAAAT----CCACGGA 530453 Query 94960 CCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGG 95019 | |||| | | | ||| | ||| | | |||| ||| | ||| ||| | ||| Sbjct 530452 ACCTACGAGACATACGCCGGCTGCCCCGTCTCAAAGGGGATTCTGCAGCATGACATGTGG 530393 Query 95020 GGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACAC 95079 ||| ||||| || | || | |||||||| | ||| || | | | | ||| Sbjct 530392 AATGTCAAGCCATCCGACCTCTGGGACTGGGACGGTCTTCGGAGAAAAATCGCCCAGCAC 530333 Query 95080 GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139 || | || ||||| |||| ||||||||||| || || ||||| |||||||| Sbjct 530332 GGAATCCGGAATAGTCTGCTGCTGGCGCCCATGCCCACAGCATCAACGGCTCAGATCCTC 530273 Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199 |||||||||||||| | || || | ||| ||||||||| ||| || || ||| || Sbjct 530272 GGCAACAACGAGTCCATTGAGCCGTACACGAGCAACGTGTATGCCAGACGAGTTCTCTCC 530213 Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGA-CGTCTCTGGGTGTGTG 95258 || ||||||| || |||| | |||||||| ||| || | || || |||| | || Sbjct 530212 GGTGAATTCCAAATCGTCAATCACCACCTCCTGAAGGATCTCACCGACT-TGGGCCTCTG 530154 Query 95259 GGGTGACAAGGTCAAGAACCAACTGCTACGC-GCCAACGGCTCCGTCCAGAA 95309 | || | | | |||||| | || | ||| |||||| ||||| ||||| Sbjct 530153 GAACGAAACGATGAAGAACGAGCTTGT-CGCTAGCAACGGTTCCGTGCAGAA 530103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494709527087560