Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq614 143 3e-29 >seq614 Length=536467 Score = 143 bits (158), Expect = 3e-29 Identities = 1114/1771 (63%), Gaps = 42/1771 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| | ||||| || | |||| || ||||| || ||| | || | | | Sbjct 531604 CCTCAGCACATGCTGATGCGCGTTTCGGTCGGAATTCACGGTGACGACGTGGAGGCCGCC 531545 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || ||| | | | ||| |||| ||||| | || || || || Sbjct 531544 ATCGAGACCTACAACTTCATGAGCGA-GAAATGGTTCACCCACGCCAGTCCGACGCTGTT 531486 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || ||||| | || ||| || | || ||||| | | | ||||| || Sbjct 531485 CAACGCGGGTACTTGCCGCCCACAGTTGAGCTCCTGTTTCCTGCTGACAATGAAGGATGA 531426 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || ||| | || ||||| | ||| || | | || || | ||||| || | || || Sbjct 531425 TTCTATCGAAGGGATCTACGAAACGCTGAGCCAATGCGCTCTGATCTCGAAATCCGCCGG 531366 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | |||||||| | || | | ||| || ||||| || Sbjct 531365 TGGTATTGGTGTAAACATCCATTGCATTCGACCTACGGGCTCTTACATCGCCGGGACGAA 531306 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | ||||| |||| ||||| || || || ||| ||| || ||||| || Sbjct 531305 CGGGACGTCGAACGGTATCGTTCCCATGCTGCGAGTTTTCAACAACACCGCTCGCTACGT 531246 Query 75571 AAATCAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATG 75626 | || | | ||| | | | || | |||| |||| | || || ||||| | Sbjct 531245 CGACCAGG-GCGGCAACAAACGACCCGGCGCTTTCGCCATCTATCTCGAGCCGTGGCACG 531187 Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA 75686 |||||| | |||||| | || | || ||| || ||||||| || Sbjct 531186 GCGATATTTTCGAGTTCTTGGATCTCCGTAAAAACACTGGCATCGAAGAGATGCGTGCCC 531127 Query 75687 GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTG 75746 | || ||||| | ||||||||||||| ||||| |||||||| || ||||| | | Sbjct 531126 GCGACCTCTTCTACGCCCTGTGGATTCCGGACCTGTTCATGAAACGCGTTGAACAAAACG 531067 Query 75747 GTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGG 75806 | | ||||| || | ||||| | | | || || ||| ||| || ||| || | Sbjct 531066 GCAAGTGGTCGCTCATGTGTCCCAATACGTGCCCGGGCCTCAGTGACACGTGGGGCGACG 531007 Query 75807 AGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAG 75866 |||| || |||||| ||||| |||| || | || | || | | | | Sbjct 531006 AGTTCGAGAAACTCTACGAGGGCTATGAGAAGGAAGGCCGTTACA-TCCGCCAGATCGAC 530948 Query 75867 CCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATG 75925 | | || | ||| | | || || || |||| || || || || || || ||| Sbjct 530947 GCCCAGAAACTGTGGTATACGATCCTGGAAAGTCAGATCGAAACCGGGACCCCGTACATG 530888 Query 75926 CTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGC 75985 || |||||||| ||||| ||| ||||| |||||| ||||| | || || |||||| || Sbjct 530887 CTGTACAAGGACGCTTGCAACCGCAAGAGCAACCAACAGAATCTCGGGACCATCAAGTGC 530828 Query 75986 TCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAAT 76045 || ||||||||||| ||||| | |||||| | || |||| || || ||||| Sbjct 530827 TCGAATCTTTGCACAGAAATCGTCGAGTACTCGTCGCCAGACGAGATCGCGGTCTGCAAC 530768 Query 76046 TTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAA 76105 ||||| || | ||||| ||| | || || | ||| || |||| || | || Sbjct 530767 TTGGCTTCGGTGGCCCT--CAACCGCT-TC-GTGCA-CGAC-GGCGCTTTCGACTTCGAG 530714 Query 76106 AAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAAT 76165 | | | ||| | || || | || ||| || ||| | |||| |||| || Sbjct 530713 AGATTGAGAGAAGTGACCAAAGCCATCACGCGAAACCTCAACAAAATCATCGACATCAAC 530654 Query 76166 TTTTATCCCGTTGAGACTGCGCGAAAG-TCTAATATGCGACACAGACCTATTGGTTTGGG 76224 | |||||||| | || |||| | || | | |||| |||| || || | || Sbjct 530653 TACTATCCCGTGCCGGAAGC-CGAACGAAGCAACAAGAGACATCGACCGATCGGAATCGG 530595 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAG--ATGAA 76282 ||| || ||||| || |||| || || || || || | || || ||| ||| Sbjct 530594 TGTCCAGGGTCTGGCCGATGCGTTCATCCTGATGCGGTATCCTTTCGA--CAGCCCGGAA 530537 Query 76283 GCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGT 76342 || | ||| |||| ||||| |||||||| ||| ||| | |||| || || Sbjct 530536 GCGATGGATCTGAACAGCAAAATCTTCGAAACCATCTATTTCGCTGCGTTGGAAGCAAGC 530477 Query 76343 TGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAA 76402 || || | || ||| ||| || |||| ||||||| | || || || |||| ||| Sbjct 530476 TGCGAGCTCGCGGAAATCCACGGAACCTACGAGACATACGCCGG--CTGCCCCGTCTCAA 530419 Query 76403 --GGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGACTGGGAT 76459 ||| | || ||| ||| |||| |||| || || ||| | | || |||||||| Sbjct 530418 AGGGGATTCTGCAGCATGACATGT-GGAATGTCAAGCCATCCGACCTCTGGGACTGGGAC 530360 Query 76460 GTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 76519 | ||| | | ||| || | || | || || ||||| || |||| || ||| Sbjct 530359 GGTCTTCGGAGAAAAATCGCCCAGCACGGAATCCGGAATAGTCTGCTGCTGGCGCCCATG 530300 Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579 || ||||| || || || || ||| | || || || || | | |||| || ||||| | Sbjct 530299 CCCACAGCATCAACGGCTCAGATCCTCGGCAACAACGAGTCCATTGAGCCGTACACGAGC 530240 Query 76580 AACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTC 76639 ||| | || ||| || ||| | ||||| || || ||||| | |||||| | Sbjct 530239 AACGTGTATGCCAGACGAGTTCTCTCCGGTGAATTCCAAATCGTCAATCACCACCTCCTG 530180 Query 76640 AATGACCTCAAGAAGATTGGTCTCTGGTCC--AAGGAT-ATGAAGGATCTCATGGTGAAA 76696 || || |||| | | || |||||| | || ||| | ||| || || || | | Sbjct 530179 AAGGATCTCACCGACTTGGGCCTCTGGAACGAAACGATGAAGAACGAGCT--TGTCGCTA 530122 Query 76697 GCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGC 76756 || |||||| | || ||| | |||||||| ||| | | || | |||||||| Sbjct 530121 GC-AACGGTTCCGTGCAGAATCT---TGATATCCCTGATAAATTGAAACAACTCTACCGG 530066 Query 76757 ACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTC 76816 || || |||||| | ||| | |||| | ||||| || || ||||| ||| Sbjct 530065 ACCGTTTGGGAACTGCCTCAGAAGAACATCATCAAAATGGCGGCTGACCGTGGGGCGTTC 530006 Query 76817 ATTGATCAAAGTCAAAGTATGA--ATCTA-TTCATGGAAAGTCCAACGATGTCCAAGCTC 76873 || ||||| || ||| | ||| ||| | ||| | || ||||| | |||||| Sbjct 530005 ATCGATCAGAGCCAATCTCTGAACATCCACTTC--GCCGAGACCAAC-TTCGGGAAGCTC 529949 Query 76874 TCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCGA 76933 | || |||||| | |||| ||||||| || | |||||||| |||||||| | || Sbjct 529948 ACGTCGATGCATTTCTACGGCTGGAAACTCGGTTTGAAAACCGGGATGTACTACTTGAGA 529889 Query 76934 TCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 | ||| | |||| | |||||||||| Sbjct 529888 ACGAAGCCCGCCGCCCAGGCGATTCAGTTCA 529858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596553112307680