Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq710 104 8e-18 >seq710 Length=1257 Score = 104 bits (114), Expect = 8e-18 Identities = 184/266 (69%), Gaps = 2/266 (1%) Strand=Plus/Plus Query 31534 CTGCCACTTGCGGGTTTGCAGCTTGCCCTCGATGTAAACCTTCGATCCCTTTTTCAGGTA 31593 ||||||||||||||| || ||||||||||| |||||||| | | || || || | Sbjct 648 CTGCCACTTGCGGGTCTGAAGCTTGCCCTCAATGTAAACGTGCCGACCTTTGCGCAAAAA 707 Query 31594 TTGCTC-GCAAACCTTGACGAGACCTTCGGTGAAGACGACGACGCTATGCCACTCGGTGC 31652 | || || || | | | || | |||| | | | ||||| |||||||| |||| Sbjct 708 GCGTTCTGCGAAG-TCGGCAAGGCGTTCGTTATAAATCGTGACGCGGTGCCACTCCGTGC 766 Query 31653 GCTCCTTGCGGTCGCCGCTGTCGCGGTCGCGCCAGCTTTCGGAAGTCGCAAGGCGAAGGC 31712 |||| | ||| ||||| ||| ||| |||| | ||||| ||||| | |||| Sbjct 767 GCTCTTGGCGTTCGCCACTGCGTTTGTCATTCCAGTTCTCGGAGGTCGCGACTGCAAGGT 826 Query 31713 TGGCGATGCTACCCCCGGCTTGTGTCTTTCGGATTTCCGGATCGGCGCCGAGATGGCCGA 31772 |||| || | |||| | ||| ||| | || || || || || || ||| |||| | Sbjct 827 TGGCAATCTTTGCCCCCGATTGAGTCGTGCGAATCTCAGGGTCACGCCCAAGACGGCCAA 886 Query 31773 TAAGAATGACTTTGTTGACGCTACCG 31798 | || ||||||||||||||||||||| Sbjct 887 TGAGGATGACTTTGTTGACGCTACCG 912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169800341668848