Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_022988.1 Length=74210 Score E Sequences producing significant alignments: (Bits) Value seq664 215 2e-51 >seq664 Length=3545 Score = 215 bits (238), Expect = 2e-51 Identities = 472/702 (67%), Gaps = 9/702 (1%) Strand=Plus/Minus Query 64668 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 64727 || || ||| || | |||||||| | | |||||| ||| ||||||||||| || | Sbjct 2036 GTCGATGTCGTTTCAACCGGCTCGCTTGGGCTGGACATCGCGCTGGGCATCGGCGGCTTG 1977 Query 64728 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 64787 || | || || | | ||| | |||||||| ||| || || || | ||| || Sbjct 1976 CCCCGCGGTCGTATCATCGAAGTTTACGGCCCTGAAAGCTCTGGAAAAACCACTTTGGCG 1917 Query 64788 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 64847 || || ||| | ||| | || ||||| || |||| ||| | |||||||| ||| Sbjct 1916 CTGCATGCGATTGCCGAAGCTCAGAAAAAAGGCGGCATTTGCGCTTTTATCGACGCAGAG 1857 Query 64848 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 64907 ||| |||| || || | || || ||| || || || |||| || ||| | | Sbjct 1856 CACGCCCTTGATCCAGGATATGCGCGTAAGCTTGGCGTTGATGTCGATAATCTCCTCCTC 1797 Query 64908 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 64967 ||||||||| | || |||||||| || ||||| | ||| || || ||| ||| Sbjct 1796 AGTCAGCCGGATGCGGGTGAGCAGGCGCTTGAGATTGCCGACACTCTTGTTCGGTCCGGC 1737 Query 64968 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 65027 | | | || |||||||||| || || || || || |||||||| || ||||| || Sbjct 1736 TCGGTAGACGTCCTCGTCGTTGATTCGGTTGCCGCGCTTGTGCCGCGGGCAGAGCTTGAG 1677 Query 65028 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 65087 ||||| || || ||||| || ||||||||||| || || || ||| ||||| ||||| Sbjct 1676 GGCGATATGGGTGACAGCCATGTCGGCCTGCATGCCCGTCTGATGAGTCAGGCATTGCGC 1617 Query 65088 AAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 65147 ||||| ||||||||| | ||| | |||||||| || | | | |||||| | ||| Sbjct 1616 AAGCTGACCGGCACCGTGTCCCGGTCCAACACGATGGTCATTTTTCTAAACCAGATCCGC 1557 Query 65148 GAGAAGATCGGC--AACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGCAAGGCTT 65205 ||| |||||| | || | || ||| ||| || || || ||||| || || Sbjct 1556 ATGAAAATCGGCGTGATGTTTGGTA--ACCC---TGAAACTACGACAGGCGGTAACGCGC 1502 Query 65206 TGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCG 65265 | | ||||| ||||| || ||| | || |||| | || | | ||||| ||| Sbjct 1501 TCAAATTCTATGCCTCTGTGCGCCTCGACATCCGCAGGATTGGAGCAATCAAGGAGCGCG 1442 Query 65266 ATGAGGCTGTC-GGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 65324 | |||| || | ||||||| ||||| |||||||| ||||| ||||| |||| ||||| Sbjct 1441 ACGAGG-TGACGGGCAACCAGACCCGCGTGAAGGTTGTCAAAAACAAAATGGCACCGCCC 1383 Query 65325 CACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC 65366 | | | |||||| | || |||| || || |||||| Sbjct 1382 TTCAAGCAGGTTGAGTTCGACATCATGTATGGTGAAGGCATC 1341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237340804308841