Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq810 145 2e-30 >seq810 Length=1564 Score = 145 bits (160), Expect = 2e-30 Identities = 343/518 (66%), Gaps = 0/518 (0%) Strand=Plus/Plus Query 7918 TTCGCGACGGTTCTGGCTGATCCTCCTTGGCGCTTTCAGAACAGCACAGGCAAAGTTGCA 7977 || ||||| || |||||||||| || ||||||||| | ||| | || || ||| ||| Sbjct 438 TTTGCGACCGTGATGGCTGATCCGCCATGGCGCTTTAAAAACCGGACTGGGAAAAACGCA 497 Query 7978 CCAGAGCACCGTCGCCTTAGCCGCTATGGCACGTTGTCGCTTCCAGAGATCGAGGCGTTG 8037 |||||| | ||| | || ||| || ||||| || ||| || ||| | Sbjct 498 CCAGAGAATGCTCGTTTGTTTCGATATTCGACATTGTCTCTAGAAGAAGTCTGCGCGCTC 557 Query 8038 CCAGTTGCGGAGATCGTAAAAGAGCCATCTCATCTTTATCTATGGGTACCGAACGCCCTC 8097 || || ||| | | | |||| || | || |||||| ||||| || ||||| || Sbjct 558 CCTGTCGCGAAAGGCATGGAAGATACAGCCCACTGTTATCTCTGGGTGCCAAACGCGCTT 617 Query 8098 CTGGCGGAAGGACTGTCCGTGATGGCGGCGTGGGGCTTCACATACAAATCGAACATCGTG 8157 || |||| || || | ||| | || ||||||||| || ||| ||| ||| | Sbjct 618 TTGCCGGACGGCCTTGCAGTGCTTCGCGCATGGGGCTTCGAATGCAAGACGATTATCACG 677 Query 8158 TGGCACAAAATCCGCAAAGACGGCGGGTCAGACGGTCGCGGCGTCGGCTTTTATTTCCGG 8217 ||| | || | || | || || ||| |||||||||| || || ||||| ||||| Sbjct 678 TGGAAAAAGGTTCGGAGGGATGGAGGGCCAGACGGTCGAGGGACTGGGTTTTACTTCCGT 737 Query 8218 AATGTGACCGAGATTATCCTGTTTGGGACAAAGGGAAAAAACGCCAGAACACTCGCACCC 8277 || ||||||||| |||| || ||| | ||| ||||| ||| | || ||| |||| Sbjct 738 AACGTGACCGAGGCACTCCTTTTCGGGGTGAGGGGGAAAAATGCCCGCACGCTCCGACCC 797 Query 8278 GGTCGCACCCAAGTGAACTACATCTCTTCGCAGAAGCGGGAGCACTCACGCAAACCAGAT 8337 || | ||| |||||||| ||| | || | || || ||| ||||||||||||| ||| Sbjct 798 GGCAGAACCTAAGTGAACCTGATCGCCTCCCGTAAACGCGAGTACTCACGCAAACCGGAT 857 Query 8338 GAACTTTATCCAATCATCGAAGCGTGTTCGTCAGGCCCGTATCTGGAACTTTTTGGTCGC 8397 || | || | || |||| || || || || | || ||||| || || || Sbjct 858 GAGCAATACGACCTTATAGAAGGCTGCTCACGTGGTCCATTCCTCGAACTGTTCGGACGT 917 Query 8398 GGTATTAGAAAGGGGTGGGCGACTTGGGGCAATCAAGC 8435 | | | |||| ||| | |||||||| ||||||| Sbjct 918 AGCAGGCGGCAGGGTTGGACAACTTGGGGGGATCAAGC 955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146172162057760