Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2150 127 2e-24 >seq2150 Length=3231181 Score = 127 bits (140), Expect = 2e-24 Identities = 350/530 (66%), Gaps = 10/530 (2%) Strand=Plus/Minus Query 146918 TCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCC 146977 ||||||| ||||| ||||| || |||| ||| | || || ||||| | || || | Sbjct 2912439 TCAGGGGTTCCACATGGTTCAGATAGATGTGGGTATCTCCGGTTGTGTGGATGAACTCTC 2912380 Query 146978 CCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGT 147037 ||| || || | || |||||| | |||| |||||| || | || ||||||| Sbjct 2912379 CCGTTTTCAGATCCGTATAGTGGGCGATGATGTGGGTGAGTAGAGCATACGATGCTATGT 2912320 Query 147038 TGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCC 147097 |||| || || || || || ||||| | || || |||||||||||||| || |||| Sbjct 2912319 TGAATGGAACTCCTAGACCAATGTCGGCGCTCCGTTGATACAGCTGGCACGATAGTTCCC 2912260 Query 147098 CGTCGGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGG 147156 |||| || ||||||||||| ||| || |||||| || || || |||||| || ||| Sbjct 2912259 CGTCAGCGACGTAAAACTGTGCA-AGACAGTGGCAAGGAGGTAGTGCCATGCTCGGGAGG 2912201 Query 147157 TCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCT 147216 || | ||||| || |||| | || || | | | ||| | || || || Sbjct 2912200 TCTTTGACATTCCAAGCAGAGAGGATCAAGCGTCGGTCATTGGGATCTTTCCGTATAGCT 2912141 Query 147217 TCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCAC 147275 || || | | || | ||||| ||| || ||| ||| | || ||| ||| | Sbjct 2912140 TCAATCAACTGGCTGACTTGGTCGGTGCCTTGACCCGTGTAATCGGT-GTGCATGTCAAT 2912082 Query 147276 GTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTT 147335 ||| |||| || || |||| ||| ||||||||||| || ||||| || || || || Sbjct 2912081 GTAAGTGGCTCCGAAATGCCGCCATTGGAAGCCGTAAACAGGCCCGAGATCACCTTCCTC 2912022 Query 147336 TCTGTGCGAGAAGCCCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 | |||||| | || | ||| |||||| | | || || | ||||||||||| Sbjct 2912021 GCGAGCCGAGAAAC---CCAGTTTGTCCAGAAACGCTCGAGAGCCATTAGCGTCCCAGAT 2911965 Query 147393 GCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442 || || || || | |||||| | | |||||||||| || || Sbjct 2911964 CGTGACATTTTTCGCTGATAACTCCTTCGCATTGGTGGAGCCCCTGAGGA 2911915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583471873850400