Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq946 123 2e-23 >seq946 Length=1044653 Score = 123 bits (136), Expect = 2e-23 Identities = 264/387 (68%), Gaps = 17/387 (4%) Strand=Plus/Plus Query 43905 GGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCA 43964 ||||| | ||||| ||||| | | ||||| || || || || || || ||| | | Sbjct 23692 GGTTTTCACAAGAGGTTCAGGTCACGGAAGCTCGCTGCTTCTACGGCTTCCAAGTCATGA 23751 Query 43965 TAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT---- 44020 | || || |||||||||||||||||| | ||| | |||| ||||||| ||| Sbjct 23752 TGGAGAACATTCATTCGGAAATGTACTCGTTGCTGCTCAATACCTACATCACGGATCCGA 23811 Query 44021 GGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAA 44079 || ||| | | |||| | || | || || || || | || ||| || || | || Sbjct 23812 TGGAACGTG-ATCATC---TATTCAGGGCCATCGAGACCATGCCATGC-ATCAAGAAGAA 23866 Query 44080 AGCAGACTGGGCCCTTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGT 44136 ||| || |||||||| || ||||| ||| |||| | | | |||||||| | || Sbjct 23867 AGCTGATTGGGCCCTGAATTGGATCGGGAATCAGAATGCTACCTACGGAGAACGTGTCGT 23926 Query 44137 CGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTT 44196 ||||| || | || ||||| |||||||| ||| |||| || | ||||| ||| | Sbjct 23927 GGCGTTCGCGGCGGTCGAAGGGATTTTCTTCAGTGGAGCGTTCGCTTCGATATTCTGGCT 23986 Query 44197 AAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCA--AATGAGTTAATAAGTCGTGAT 44254 |||||||| ||| ||||||| || ||||| ||||| || ||| |||| | || Sbjct 23987 CAAGAAACGCGGTCTGATGCCCGGATTGAC--TTTCAGTAACGAGCTAATTTCGAGAGAC 24044 Query 44255 GAAGGCTTACATTGCGATTTTGCTTGC 44281 || ||| | ||| |||||| |||||| Sbjct 24045 GAGGGCCTCCATACCGATTTCGCTTGC 24071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397445289927055