Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq614 147 7e-30 >seq614 Length=536467 Score = 147 bits (162), Expect = 7e-30 Identities = 370/549 (67%), Gaps = 15/549 (3%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || || ||||||||| |||||||||||||| || || ||| |||||| Sbjct 531283 CCCATGCTGCGAGTTTTCAACAACACCGCTCGCTACGTCGACCAGGGCGGCAACAAACGA 531224 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || || || ||| ||||||| || ||||||||||||| ||| ||| ||| || | Sbjct 531223 CCCGGCGCTTTCGCCATCTATCTCGAGCCGTGGCACGGCGATATTTTCGAGTTCTT--GG 531166 Query 255101 CTGTCCG--ACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCT 255158 | |||| | || || |||| ||| ||| || ||||||||| ||| | ||| | | Sbjct 531165 ATCTCCGTAAAAACACTGGCATCGAAGAGATGCGTGCCCGCGACCTCTTCTACGCCCTGT 531106 Query 255159 GG-TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGT 255217 || | | | || ||||| ||| |||||| |||| | ||| | ||| ||||||||| Sbjct 531105 GGATTCCG-GACCTGTTCATGAAACGCGTTGAACAAAACGGCAAGTGGTCGCTCATGTGT 531047 Query 255218 CCCAACTTATCGCCCGGTCT-AGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCT 255276 ||||| | || || || ||| ||| | ||||| |||||||| || ||||| || Sbjct 531046 CCCAATACGTGCCCGGGCCTCAGT-GACACGTGGGGCGACGAGTTCGAGAAACTCTACGA 530988 Query 255277 GGAGTACGAGCGTGCCGGCCGGTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGGAACAC 255336 || || ||| | ||||| | | | ||||| | ||| |||| | ||| | || Sbjct 530987 GGGCTATGAGAAGGAAGGCCGTTACATCCGCCAGATCGACGCCCAGAAACTGTGGTATAC 530928 Query 255337 GATGGTGCGCATGCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGAC-CACATAA 255395 ||| || | ||| | |||||||| | |||| | | || |||| ||| | || Sbjct 530927 GATCCTGGAAAGTCAGATCGAAACCGGGACCCCGTACATGCTGTACAAGGACGCTTGCAA 530868 Query 255396 ACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAACCTGTGCACCGAGA 255455 |||| | | ||||||| | | ||| || || ||||||| || ||||| || | Sbjct 530867 CCGCAAGAGC-AACCAACAGAATCTCGGGACCATCAAGTGCTCGAATCTTTGCACAGAAA 530809 Query 255456 TTACGT--TGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTCCATCTCGCT 255513 | ||| | || |||| | | ||| | || || ||||||||||| || | | || Sbjct 530808 T--CGTCGAGTACTCGTCGCCAGACGAGATCGCGGTCTGCAACTTGGCTTCGGTGGCCCT 530751 Query 255514 CACACCGCT 255522 || |||||| Sbjct 530750 CA-ACCGCT 530743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588291004922895