Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq674 185 2e-42 >seq674 Length=2717 Score = 185 bits (204), Expect = 2e-42 Identities = 456/679 (67%), Gaps = 31/679 (5%) Strand=Plus/Minus Query 24997 GTGA-TCGTCACAGTGCGGGCAGCAAACATAGAAGTGTCGCTGGTCGCCCATTTCATACG 25055 |||| |||| |||||| ||||| | || || || || ||||| || ||| | | Sbjct 965 GTGACTCGTGACAGTGTGGGCATCGGACGTAAAAAAACCGTTGGTCCCCTGCCTCAAAAG 906 Query 25056 CTTTTTCGATGTACGATTCCCCCTTAAGGGTAGGGGTGCTGA--TTTCCAGCAAAAACCG 25113 || |||| ||||| || | || || || ||||| ||| |||| | |||||| || Sbjct 905 CTGTTTCTATGTAAGAGAAGTCTTTCAGTGT--GGGTGTTGAAATTTCGATCAAAAAGCG 848 Query 25114 TTGGTCACCGAAGGTGGCAGAACGCTGCCACAGCAGGCCAACCGGGTGACCTTCG-CTGG 25172 || || || ||||| || | |||||||| | || ||| ||||| |||||| ||| Sbjct 847 TTCATCGCCAAAGGTTGCTGCCCGCTGCCAGATGAGAGAAACTGGGTGCCCTTCGTCTGT 788 Query 25173 TTCGTTCATATCCGTCTACCTCGTCACATACGATCAGCGGCGCTGAACGACCGCGCATGG 25232 || | || ||||| | ||||| || || || ||||| || || || |||||||| | Sbjct 787 CGCGCTG-TAACCGTCGATTTCGTCGCAGACAATGAGCGGAGCGGATCGCCCGCGCATTG 729 Query 25233 TCTTTGGCGAACCGGACCATGCGAACATCAGGAACCCGCCAGGGTATGATTTCATTTTCT 25292 | | ||||| | ||| || |||||||| || || |||||||| || ||||| | | Sbjct 728 TTCGAGTGGAACCCGCCCAAGCAAACATCAGAAATCCACCAGGGTAGGACTTCATGCTTT 669 Query 25293 GGTTGTTCACCCCGTCGCGGCCACGCGGTTTGGCAATG-----GCG--TTGTTTACCGGC 25345 | |||||||| || || || || |||||||| |||| | ||| |||||| Sbjct 668 GATTGTTCACGCCTTCACGACCGCGCGGTTTCGCAACGAGTGCGCGGATTGTTT------ 615 Query 25346 GCGCATTCTTCCGCCAGCGGGTTGAATTTTGTTTCCAGCCAGGTGCGCAAGTCATCCTGG 25405 || | | || ||| ||||||||||| ||||| |||||||| | ||| | || Sbjct 614 -CGGAGGCGTCAACCAAAGGGTTGAATTTGGTTTCAAGCCAGGTCTTAAGGTCGCCTTGC 556 Query 25406 CTTGGCTGCATCATCATCTGGCTGCGCGGTTCAGCGGCTACGCT---GTACGCCTGCA-C 25461 || || | |||||| || ||| || | || ||| || | ||| |||| | | Sbjct 555 GAAGGTTGTAACATCATTTGCGAGCGTGG--CCGCTGCT-CGATTGCGTAACCCTGTACC 499 Query 25462 GC-ACAGTGCCAGCATGGTTTTGCCCACCTGTGCGCCCCACATCAGCGTTACGCGGTAGC 25520 || | || || | | ||||| || | ||| |||||||||||||||| ||| || | || Sbjct 498 GCTAAAGCGCATG--TCGTTTTACCGATCTGGGCGCCCCACATCAGCGATACACGATGGC 441 Query 25521 AATCCGGGTCAACCAGCATGTCCATTGGTTCGCGCTGGTATGGCGCGTTATCCAGGCGCA 25580 | || || | | | | ||||||||| || || ||| ||| || || | | ||| Sbjct 440 ATTCAGGATTTATAAACTGGTCCATTGGCTCACGTTGGATTGGAGCATTTGCAACGCGAT 381 Query 25581 GCGGCCCTGGCACGGCGTTGCCAGACGGAATGCGGATGTTTGCCTGCGCCCACTCTGACG 25640 || ||||| |||||||| |||||||| |||| || |||||||| |||| Sbjct 380 ATAATCCCGGCACTGCGTTGCCTTCGGGAATGCGTATGTGCCGCTCTGCCCACTCGGACG 321 Query 25641 GCTTCATGTCTGGCGGCGG 25659 | | |||| |||||| Sbjct 320 GTGCTAAATCTGTCGGCGG 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133206102498696