Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq664 206 1e-48 >seq664 Length=3545 Score = 206 bits (228), Expect = 1e-48 Identities = 470/702 (67%), Gaps = 9/702 (1%) Strand=Plus/Minus Query 66458 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCCCTGGGCATCGGGGGGTAC 66517 || || ||| || | |||||||| | | |||||| ||| ||||||||||| || | Sbjct 2036 GTCGATGTCGTTTCAACCGGCTCGCTTGGGCTGGACATCGCGCTGGGCATCGGCGGCTTG 1977 Query 66518 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66577 || | || || | | ||| | |||||||| ||| || || || | ||| || Sbjct 1976 CCCCGCGGTCGTATCATCGAAGTTTACGGCCCTGAAAGCTCTGGAAAAACCACTTTGGCG 1917 Query 66578 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66637 || || ||| | ||| | || ||||| || |||| ||| | |||||||| ||| Sbjct 1916 CTGCATGCGATTGCCGAAGCTCAGAAAAAAGGCGGCATTTGCGCTTTTATCGACGCAGAG 1857 Query 66638 CACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66697 ||| |||| || || | || || ||| || || || |||| || ||| | | Sbjct 1856 CACGCCCTTGATCCAGGATATGCGCGTAAGCTTGGCGTTGATGTCGATAATCTCCTCCTC 1797 Query 66698 GTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66757 |||||| ||| | || |||||||| || ||||| | ||| || || ||| ||| Sbjct 1796 AGTCAGCCGGATGCGGGTGAGCAGGCGCTTGAGATTGCCGACACTCTTGTTCGGTCCGGC 1737 Query 66758 GAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 66817 | | | || |||||||||| || || || || || |||||||| || ||||| || Sbjct 1736 TCGGTAGACGTCCTCGTCGTTGATTCGGTTGCCGCGCTTGTGCCGCGGGCAGAGCTTGAG 1677 Query 66818 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCACAGGCCATGCGC 66877 ||||| || || ||||| || ||||||||||| || || || ||| ||||| ||||| Sbjct 1676 GGCGATATGGGTGACAGCCATGTCGGCCTGCATGCCCGTCTGATGAGTCAGGCATTGCGC 1617 Query 66878 AAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 66937 ||||| || |||||| | ||| | |||||||| || | | | |||||| | ||| Sbjct 1616 AAGCTGACCGGCACCGTGTCCCGGTCCAACACGATGGTCATTTTTCTAAACCAGATCCGC 1557 Query 66938 GAGAAGATCGGC--AACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTT 66995 ||| |||||| | || | || ||| ||| || || || ||||| || || Sbjct 1556 ATGAAAATCGGCGTGATGTTTGGTA--ACCC---TGAAACTACGACAGGCGGTAACGCGC 1502 Query 66996 TGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCG 67055 | | ||||| ||||| || || | || |||| | || | | ||||| ||| Sbjct 1501 TCAAATTCTATGCCTCTGTGCGCCTCGACATCCGCAGGATTGGAGCAATCAAGGAGCGCG 1442 Query 67056 ATGAGGCTGTC-GGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 67114 | |||| || | ||||||| ||||| |||||||| ||||| ||||| |||| ||||| Sbjct 1441 ACGAGG-TGACGGGCAACCAGACCCGCGTGAAGGTTGTCAAAAACAAAATGGCACCGCCC 1383 Query 67115 CACCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC 67156 | | | |||||| | || |||| || || |||||| Sbjct 1382 TTCAAGCAGGTTGAGTTCGACATCATGTATGGTGAAGGCATC 1341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242854255736274