Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2150 116 3e-21 >seq2150 Length=3231181 Score = 116 bits (128), Expect = 3e-21 Identities = 218/318 (69%), Gaps = 2/318 (1%) Strand=Plus/Minus Query 29606 AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCA 29665 || |||||||| | ||||| | |||| ||| | ||||| |||||||| |||| Sbjct 2912479 AGGGTGGGAAAATCCTTCGGCTCTCGTTCGATCTGCTTGCTCAGGGGTTCCACATGGTTC 2912420 Query 29666 AGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 29725 || |||| ||| | |||||| ||||||| |||||||||| || || | || | Sbjct 2912419 AGATAGATGTGGGTATCTCCGGTTGTGTGGATGAACTCTCCCGTTTTCAGATCCGTATAG 2912360 Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785 || || || |||| ||||| |||| || || ||||| || || || || || || Sbjct 2912359 TGGGCGATGATGTGGGTGAGTAGAGCATACGATGCTATGTTGAATGGAACTCCTAGACCA 2912300 Query 29786 ATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAACTGA 29845 ||||| | || || || ||||||||||| || || ||||| ||||||||||| Sbjct 2912299 ATGTCGGCGCTCCGTTGATACAGCTGGCACGATAGTTCCCCGTCAGCGACGTAAAACTG- 2912241 Query 29846 CACATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACA 29904 || | || ||||| ||||| || |||||| | ||||||| ||||| ||| | Sbjct 2912240 TGCAAGACAGTGGCAAGGAGGTAGTGCCATGCTCGGGAGGTCTTTGACATTCCAAGCAGA 2912181 Query 29905 CACGATGATGCGCCTGTC 29922 | ||| | ||| | ||| Sbjct 2912180 GAGGATCAAGCGTCGGTC 2912163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406152255297946