Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq946 123 2e-23 >seq946 Length=1044653 Score = 123 bits (136), Expect = 2e-23 Identities = 428/664 (64%), Gaps = 8/664 (1%) Strand=Plus/Minus Query 4256 TTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATT 4315 ||| ||||| ||| || || || |||||||| || || || || || ||||| || | Sbjct 24362 TTTCTGGTACTCGCCGACGCGTTTCTCGAAGAAGTTCGTCTTCCCCTCCAACGAGATTTG 24303 Query 4316 TTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAG 4375 ||||| |||||||| ||||| ||| | || || |||| || | || | Sbjct 24302 CTCCATGAAATCAAATGGATTCTGACTGTTCCACAACTTGTCGCACTCGAGCTCAACCAA 24243 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 || ||| || || ||||||||||| || || ||||||| || || || || || | | Sbjct 24242 CAGTCGATCGGCGACAAATTCTATGTATTGTTTCATGAGATCACAATTCATACCGAGCA- 24184 Query 4436 TCTCACA-GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494 || | || |||| || | || | ||||| || || || | ||||| | ||| | Sbjct 24183 TCGCGCACGGTAAAGCTTCGGTGAGGAACTCCTGCTCGATCGCAACGGCGTTGCGGATGA 24124 Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554 | || | || ||| || ||||| | ||||||| || |||| | || || | Sbjct 24123 TCTCATAGATCCGCTCTACGGACGGTTTCTGGACTAAGTGTCTGAACATAAGGCAAGCGA 24064 Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614 |||| ||| | || |||||||| ||| || |||||| || || |||||||||| Sbjct 24063 AATCGGTATGGAGGCCCTCGTCTCTCGAAATTAGCTCGTTACTGAAAGTCAATCCGGGCA 24004 Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674 | | ||| | || || ||||| ||||| | || || | ||| ||||| || |||| Sbjct 24003 TCAGACCGCGTTTCTTGAGCCAGAATATCGAAGCGAACGCTCCACTGAAGAAAATCCCTT 23944 Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT---AATCC 4731 | || || || ||||| || | || ||| || | || || | || |||| Sbjct 23943 CGACCGCCGCGAACGCCACGACACGTTCTCCG---TAGGTAGCATTCTGATTCCCGATCC 23887 Query 4732 ATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA 4791 | || | ||||| | |||||| ||||| | ||| || || || | || || | |||| Sbjct 23886 AATTCAGGGCCCAATCAGCTTTCTTCTTGATGCATGGCATGGTCTCGATGGCCCTGAATA 23827 Query 4792 ATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAG 4851 | | ||| | || || || || || | | || | |||||||| | Sbjct 23826 GATGATCACGTTCCATCGGATCCGTGATGTAGGTATTGAGCAGCAACGAGTACATTTCCG 23767 Query 4852 AATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAA 4911 |||| || || || || | || || ||||| ||||| | |||||| || || |||| Sbjct 23766 AATGAATGTTCTCCATCATGACTTGGAAGCCGTAGAAGCAGCGAGCTTCCGTGACCTGAA 23707 Query 4912 CTTC 4915 | || Sbjct 23706 CCTC 23703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427038092481263