Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq614 255 8e-63 >seq614 Length=536467 Score = 255 bits (282), Expect = 8e-63 Identities = 1187/1868 (64%), Gaps = 16/1868 (1%) Strand=Plus/Plus Query 76760 CTTTATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAG 76819 ||| ||||| | || || | || |||||||| | | ||||| || || | | Sbjct 529835 CTTGATTTTGGTTTTGTCGACAGTGAACTGAATCGCCTGGGCGGCGGGCTTCGTTCTCAA 529894 Query 76820 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTT 76879 |||||||| || ||||| | ||| || |||| |||||||||||||| || || || Sbjct 529895 GTAGTACATCCCGGTTTTCAAACCGAGTTTCCAGCCGTAGAAATGCATCGACGTGAGCTT 529954 Query 76880 GGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 76939 | | | ||||| | || || |||| || || || ||||||||||| || || Sbjct 529955 CCCGAAGTTGGTCTCGGCGAAGTGGATGTTCAGAGATTGGCTCTGATCGATGAACGCCCC 530014 Query 76940 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 76999 | |||||||||||||| || ||| |||| ||||| | |||||||| || | | | Sbjct 530015 ACGGTCAGCCGCCATTTTGATGATGTTCTTCTGAGGCAGTTCCCAAACGGTCCGGTAGAG 530074 Query 77000 TTGTTTGATATCATCTGGAAGGTTTGTATTTTGAATGGAACCA---CCATCTGATATAAT 77056 |||||| | | ||| || | | ||| || | |||||| | | | || | | Sbjct 530075 TTGTTTCAATTTATCAGGGATATCAAGATTCTGCACGGAACCGTTGCTAGC-GACAAGCT 530133 Query 77057 TGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGG 77116 || |||| || || ||||| | | || || | | | | ||||| || | Sbjct 530134 CGT--TCTTCATCGTTTCGTTCCAGAGGCCCAAGTCGGTGAGATCCTTCAGGAGGTGGTG 530191 Query 77117 ATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGG 77176 ||| || ||||| ||||| || || | |||| | | || | || || || || || Sbjct 530192 ATTGACGATTTGGAATTCACCGGAGAGAACTCGTCTGGCATACACGTTGCTCGTGTACGG 530251 Query 77177 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCAC 77236 || | || || ||||| || | || ||||| || || || || ||||| || |||| Sbjct 530252 CTCAATGGACTCGTTGTTGCCGAGGATCTGAGCCGTTGATGCTGTGGGCATGGGCGCCAG 530311 Query 77237 CAATAAACTATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTA-GATATTTCCAATCC 77294 || | |||||| | || || || || | |||||| ||| | || | ||| ||| Sbjct 530312 CAGCAGACTATTCCGGATTCCGTGCTGGGC-GATTTT-TCTCCGAAGACCGTCCCAGTCC 530369 Query 77295 CAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT 77354 || || || || || |||| ||| | || | || ||||| || || | Sbjct 530370 CAGAGGTCGGATGGCTTGACATTCCACATGTCATGCTGCAGAATCCCCTTTGAGACGGGG 530429 Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 | || ||||| || || | ||| | |||| || || || || || |||||||| Sbjct 530430 CAGCCGGCGTATGTCTCGTAGGTTCCGTGGATTTCCGCGAGCTCGCAGCTTGCTTCCAAC 530489 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 || || |||| || |||||||| || || | || ||||| ||||| || || Sbjct 530490 GCAGCGAAATAGATGGTTTCGAAGATTTTGCTGTTCAGATCCATCGCTTCCGGGCTGTCG 530549 Query 77475 AACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGT 77534 || ||||| | | || || || ||||| || | ||||| || || || || || ||| Sbjct 530550 AAAGGATACCGCATCAGGATGAACGCATCGGCCAGACCCTGGACACCGATTCCGATCGGT 530609 Query 77535 CTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATT 77594 | ||||||||| ||| || ||||| || | ||||| || || ||||| || ||| Sbjct 530610 CGATGTCTCTTGTTGCTTCGTTCGGCTTCCGGCACGGGATAGTAGTTGATGTCGATGATT 530669 Query 77595 TTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT 77654 || ||||| |||| | |||| ||| || | | | | || || || Sbjct 530670 TTGTTGAGGTTTCGCGTGATGGCTTTGGTCACTTCTCTCAATCTCTCGAAGTCGAAAGCG 530729 Query 77655 CCATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT-T 77713 || || || || ||| | || | || || | || || || || | ||| | | Sbjct 530730 CCGTCGTGCACGAAGCGGTTGAGGGCCACCGAAGCCAAGTTGCAGACCGCGATCTCGTCT 530789 Query 77714 AGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATT 77773 ||| | || | | || || || || ||||| || ||||| || || ||||| Sbjct 530790 GGCGACGAG-TACTCGACGATTTCTGTGCAAAGATTCGAGCACTTGATGGTCCCGAGATT 530848 Query 77774 TTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTC 77833 |||||||||||||| ||||| | |||||| || || || |||| ||||||||||| Sbjct 530849 CTGTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTACAGCATGTACGGGGTCCCGGTTTC 530908 Query 77834 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTATCATAGATTTGTATC 77892 ||||| ||| | || | | ||| | | ||| | | | ||| |||| | Sbjct 530909 GATCTGACTTTCCAGGATCGTATACCACA-GTTTCTGGGCGTCGATCTGGCGGATGTAAC 530967 Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA 77952 | | || | ||||| || || || || || || ||||| ||| | Sbjct 530968 GGCCTTCCTTCTCATAGCCCTCGTAGAGTTTCTCGAACTCGTCGCCCCACGTGTCACTGA 531027 Query 77953 ATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCA 78012 || ||||| ||| || ||||| | ||||| | || | || | ||| ||||||| Sbjct 531028 GGCCCGGGCACGTATTGGGACACATGAGCGACCACTTGCCGTTTTGTTCAACGCGTTTCA 531087 Query 78013 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTC 78072 | || || || || ||||| || || || || || |||| | ||||| | | Sbjct 531088 TGAACAGGTCCGGAATCCACAGGGCGTAGAAGAGGTCGCGGGCACGCATCTCTTCGATGC 531147 Query 78073 CTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 78132 | || || || ||||| | ||||| | |||||| ||||| || || ||||| | Sbjct 531148 CAGTGTTTTTACGGAGATCCAAGAACTCGAAAATATCGCCGTGCCACGGCTCGAGATAGA 531207 Query 78133 TTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTAT 78192 | || | | | || |||||||| || || ||||| || | || | |||||||| || Sbjct 531208 TGGCGAAAGCGCCGGGTCGTTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTGA 531267 Query 78193 AAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252 |||||| || ||| |||| |||||||| || || || || || || | || ||| | Sbjct 531268 AAACTCGCAGCATGGGAACGATACCGTTCGACGTCCCGTTCGTCCCGGCGATGTAAGAGC 531327 Query 78253 CACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | | | ||||| | ||| || || || || || || || || || |||| Sbjct 531328 CCGTAGGTCGAATGCAATGGATGTTTACACCAATACCACCGGCGGATTTCGAGATCAGAG 531387 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372 |||| | ||| || |||||||| || || ||| |||||| |||| | || || | Sbjct 531388 CGCATTGGCTCAGCGTTTCGTAGATCCCTTCGATAGAATCATCCTTCATTGTCAGCAGGA 531447 Query 78373 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432 ||||| || || | | ||| || || || || | |||||| || || | Sbjct 531448 AACAGGAGCTCAACTGTGGGCGGCAAGTACCCGCGTTGAACAGCGTCGGACTGGCGTGGG 531507 Query 78433 TAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC-CATTGA 78491 | |||||||| || | | ||||| || || || || | || | ||| || | Sbjct 531508 TGAACCATTTCTCGCTCATGAAGTTGTAGGTCTCGATGGCGGCCTCCACGTCGTCACCG- 531566 Query 78492 TGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTT 78551 |||||||| |||| || ||||||| ||| ||||||||||| || || | ||| | Sbjct 531567 TGAATTCCGACCGAAACGCGCATCAGCATGTGCTGAGGTCTCTCGACGATTTTACCGTCG 531626 Query 78552 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 78611 ||||| | | ||| ||| || | ||| || || || |||||||| ||||| Sbjct 531627 ATTTTTAGGAGGTAGGATCGCTCGAGGGTTCGGAATCCGAAGTAGTTGTAGTTGAAGTCC 531686 Query 78612 CTCTCGTA 78619 || ||||| Sbjct 531687 CTATCGTA 531694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694649601091040