Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq614 284 2e-71 seq946 149 9e-31 >seq614 Length=536467 Score = 284 bits (314), Expect = 2e-71 Identities = 1191/1866 (64%), Gaps = 12/1866 (1%) Strand=Plus/Plus Query 75355 CTTTATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAG 75414 ||| ||||| | || || | ||||||||||| | || || || || || | | Sbjct 529835 CTTGATTTTGGTTTTGTCGACAGTGAACTGAATCGCCTGGGCGGCGGGCTTCGTTCTCAA 529894 Query 75415 ATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTT 75474 |||||||| || ||||| | ||| || |||| |||||||||||||| || || || Sbjct 529895 GTAGTACATCCCGGTTTTCAAACCGAGTTTCCAGCCGTAGAAATGCATCGACGTGAGCTT 529954 Query 75475 GGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCC 75534 | | | ||||| | || || |||| || || || ||||||||||| || || Sbjct 529955 CCCGAAGTTGGTCTCGGCGAAGTGGATGTTCAGAGATTGGCTCTGATCGATGAACGCCCC 530014 Query 75535 TCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAAC 75594 | |||||||||||||| || ||| |||| ||||| | |||||||| || | | | Sbjct 530015 ACGGTCAGCCGCCATTTTGATGATGTTCTTCTGAGGCAGTTCCCAAACGGTCCGGTAGAG 530074 Query 75595 TTGTTTGATATCATCTGGAAGATTTGTATTTTGAATGGATCCGCCATCAGATATAATTGT 75654 |||||| | | ||| || | || ||| || | ||| ||| || | || Sbjct 530075 TTGTTTCAATTTATCAGGGATATCAAGATTCTGCACGGAACCGTTGCTAGCGACAAGCTC 530134 Query 75655 ATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATT 75714 ||||| ||| || ||||| | ||||| | | | | ||||| || |||| Sbjct 530135 GTTCTTCATCGTTTCGTTCCAGAGGCCCAAGTCGGTGAGATCCTTCAGGAGGTGGTGATT 530194 Query 75715 AACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTC 75774 || ||||| ||||| || || | |||| || | || | || || || || || || Sbjct 530195 GACGATTTGGAATTCACCGGAGAGAACTCGTCTGGCATACACGTTGCTCGTGTACGGCTC 530254 Query 75775 CACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAA 75834 | || || ||||| || | || ||||| ||||| || || ||||| || |||| || Sbjct 530255 AATGGACTCGTTGTTGCCGAGGATCTGAGCCGTTGATGCTGTGGGCATGGGCGCCAGCAG 530314 Query 75835 TAAACTATTTCTGAGACCATG-TGTTCTGATTTTATCT-TTTAGATATTTCCAATCCCAA 75892 | |||||| | || || || || | |||||| ||| ||| | ||| ||||| Sbjct 530315 CAGACTATTCCGGATTCCGTGCTGGGC-GATTTT-TCTCCGAAGACCGTCCCAGTCCCAG 530372 Query 75893 AGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGAT 75952 || || ||||| |||| ||| | || | || ||||| || || | | Sbjct 530373 AGGTCGGATGGCTTGACATTCCACATGTCATGCTGCAGAATCCCCTTTGAGACGGGGCAG 530432 Query 75953 CCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCA 76012 || ||||| ||||| || |||| |||| || || ||||| || || || |||||| Sbjct 530433 CCGGCGTATGTCTCGTAGGTTCCGTGGATTTCCGCGAGCTCGCAGCTTGCTTCCAACGCA 530492 Query 76013 CCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAA 76072 || |||| || |||||||| || || | || ||||| |||||| | || || ||| Sbjct 530493 GCGAAATAGATGGTTTCGAAGATTTTGCTGTTCAGATCCATCGCTTCCGGGCTGTCGAAA 530552 Query 76073 GGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTA 76132 ||||| | | || || || ||||| || || ||||| || || || || || |||| | Sbjct 530553 GGATACCGCATCAGGATGAACGCATCGGCCAGACCCTGGACACCGATTCCGATCGGTCGA 530612 Query 76133 TGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTA 76192 |||||||| ||| ||| ||||| || | || || || || || || || ||||| Sbjct 530613 TGTCTCTTGTTGCTTCGTTCGGCTTCCGGCACGGGATAGTAGTTGATGTCGATGATTTTG 530672 Query 76193 TTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA 76252 ||||| |||| | |||| ||| || | | | | || || || || Sbjct 530673 TTGAGGTTTCGCGTGATGGCTTTGGTCACTTCTCTCAATCTCTCGAAGTCGAAAGCGCCG 530732 Query 76253 TCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312 || ||| || || || || | || || | || || || || | ||| | | Sbjct 530733 TCGTGCACGAAGCGGTTGAGGGCCACCGAAGCCAAGTTGCAGACCGCGATCTCGTCTGGC 530792 Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372 | || | | || || ||||| ||||| |||||||| || || ||||| ||| Sbjct 530793 GACGAGTACTCGACGATTTCTGTGCAAAGATTCGAGCACTTGATGGTCCCGAGATTCTGT 530852 Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432 ||||||||||| ||| || | |||||| || || | |||| || || ||||| ||| Sbjct 530853 TGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTACAGCATGTACGGGGTCCCGGTTTCGATC 530912 Query 76433 TGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCG--C 76489 || ||| | || | | ||| | | ||| || | || |||| || | Sbjct 530913 TGACTTTCCAGGATCGTATACCACA-GTTTCTGGGCGTCGATCTGGCGGATGTAACGGCC 530971 Query 76490 TTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAA 76549 ||| || | ||||| || | || || || || ||||| ||| | Sbjct 530972 TTC-CT-TCTCATAGCCCTCGTAGAGTTTCTCGAACTCGTCGCCCCACGTGTCACTGAGG 531029 Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 || || || ||| |||||||| | ||||||| || | || | ||| |||||||| Sbjct 531030 CCCGGGCACGTATTGGGACACATGAGCGACCACTTGCCGTTTTGTTCAACGCGTTTCATG 531089 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 || || || || ||||| || || || || || |||| | ||||| | || Sbjct 531090 AACAGGTCCGGAATCCACAGGGCGTAGAAGAGGTCGCGGGCACGCATCTCTTCGATGCCA 531149 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 || || || ||||| | |||||| | |||||| ||||| || || ||||| || Sbjct 531150 GTGTTTTTACGGAGATCCAAGAACTCGAAAATATCGCCGTGCCACGGCTCGAGATAGATG 531209 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | | || |||||||| || || ||||| || | || | || ||||| || || Sbjct 531210 GCGAAAGCGCCGGGTCGTTTGTTGCCGCCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAA 531269 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 |||| || ||| |||| || ||||| || || || || || || | || ||| || Sbjct 531270 ACTCGCAGCATGGGAACGATACCGTTCGACGTCCCGTTCGTCCCGGCGATGTAAGAGCCC 531329 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 | ||||| | || || || || || || || ||| ||||| ||||| Sbjct 531330 GTAGGTCGAATGCAATGGATGTTTACACCAATACCACCGGCGGATTTCGAGATCAGAGCG 531389 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAA 76969 || | ||| || || ||||| || || ||| ||||||| |||| | || || ||| Sbjct 531390 CATTGGCTCAGCGTTTCGTAGATCCCTTCGATAGAATCATCCTTCATTGTCAGCAGGAAA 531449 Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029 ||| || || | | ||| || || || |||| || ||| || || ||| Sbjct 531450 CAGGAGCTCAACTGTGGGCGGCAAGTACCCGCGTTGAACAGCGTCGGACTGGCGTGGGTG 531509 Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGATG 77088 |||||||| || | | ||||| || || || | || || | || || | || Sbjct 531510 AACCATTTCTCGCTCATGAAGTTGTAGGTCTCGATGGCGGCCTCCACGTCGTCACCG-TG 531568 Query 77089 AATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTAT 77148 |||||| || | || ||||||| ||| |||||||||| || || | ||| | || Sbjct 531569 AATTCCGACCGAAACGCGCATCAGCATGTGCTGAGGTCTCTCGACGATTTTACCGTCGAT 531628 Query 77149 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 77208 ||| | | ||| ||| || | ||| || || || |||||||| ||||| || Sbjct 531629 TTTTAGGAGGTAGGATCGCTCGAGGGTTCGGAATCCGAAGTAGTTGTAGTTGAAGTCCCT 531688 Query 77209 TTCGTA 77214 ||||| Sbjct 531689 ATCGTA 531694 >seq946 Length=1044653 Score = 149 bits (164), Expect = 9e-31 Identities = 456/695 (66%), Gaps = 20/695 (3%) Strand=Plus/Minus Query 46314 ATCTTCTT-GT--GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAA 46370 |||||||| || | ||| ||||| ||| ||||| || || || ||||||||||| || Sbjct 24389 ATCTTCTTTGTTGGCCATTACTCCGGCTTTCTGGTACTCGCCGACGCGTTTCTCGAAGAA 24330 Query 46371 ATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATA 46430 || || || || ||||| || || | ||||| |||||||| ||||| | || | Sbjct 24329 GTTCGTCTTCCCCTCCAACGAGATTTGCTCCATGAAATCAAATGGATTCTGACTGTTCCA 24270 Query 46431 AAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATACGTTTT 46490 | || | | | | || | ||||| ||| || || |||||||| || ||| Sbjct 24269 CAACTTGTCGCACTCGAGCTCAACCAACAGTCGATCGGCGACAAATTCTATGTATTGTTT 24210 Query 46491 CATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTG 46550 ||| | ||||||||||| || | | | ||||| ||| || || || ||||| || Sbjct 24209 CATGAGATCACAATTCATACCGAGCATCGCGCACGGTAAAGCTTCGGTGAGGAACTCCTG 24150 Query 46551 TTCAATAGTGACAGCAT--CCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGATGC 46608 || || | || || | | ||| | || | | | | | | || ||| || Sbjct 24149 CTCGATCGCAACGGCGTTGCGGATGATCTCATAGATCCGCTCTACGGAC--GGTTTCTGG 24092 Query 46609 ATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATT 46668 | || ||| | ||||| | || || ||||| ||| ||||| || ||||| |||| Sbjct 24091 ACTAAGTGTCTGAACATAAGGCAAGCGAAATCGGTATGGAGGCCCTCGTCTCTCGAAATT 24032 Query 46669 AATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCC 46728 | |||||| || || | || ||||| || || || || |||||||| ||||| | Sbjct 24031 AGCTCGTTACTGAAAGTCAATCCGGGCATCAGACCGCGTTTCTTGAGCCAGAATATCGAA 23972 Query 46729 GCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCG 46788 ||||| | |||| ||||| || ||||| || |||||||| || || | | |||||| Sbjct 23971 GCGAACGCTCCACTGAAGAAAATCCCTTCGACCGCCGCGAACGCCACGACACGTTCTCCG 23912 Query 46789 TAACTGGCATCATTATGA------ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACA 46842 || || | |||| ||| ||||| | | ||||||||||| || ||||| | Sbjct 23911 TA---GGTAGCATTCTGATTCCCGATCCAATTCAGGGCCCAATCAGCTTTCTTCTTGATG 23855 Query 46843 CAAGGCATTGTTTCTATAGCATTAAAGAGA-AAGtttttttCATCACTATCTTTAACATA 46901 || ||||| || || || || | || ||| | || |||| ||| | | || Sbjct 23854 CATGGCATGGTCTCGATGGCCCTGAATAGATGATCACGTTCCATC-GGATCCGTGATGTA 23796 Query 46902 TGTATCTATTAAAAGACTA-TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATC 46960 |||| | | | || | |||||||| ||||||||||| || || | || || | Sbjct 23795 GGTATTGAGCAGCA-ACGAGTACATTTCCGAATGAATGTTCTCCATCATGACTTGGAAGC 23737 Query 46961 CGTAAAAACATCTTGCTTCAGTAATCTGTACCTCT 46995 |||| || || | ||||| || | ||| |||||| Sbjct 23736 CGTAGAAGCAGCGAGCTTCCGTGACCTGAACCTCT 23702 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 47016 ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATA 47075 ||| ||||| || |||||||| || || ||||| ||||| | || || || || | Sbjct 23583 ATTTTCATTGACAATTCCATCCGATGCTGCGAAAAAAGCCAAGATGTGCTTGATGAACTC 23524 Query 47076 TTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTC 47135 || ||| | | ||| ||| | |||||| ||||| || | ||| ||||| || Sbjct 23523 TTGTTCCTGAGAGCTCATTTTGTGCCAGTCTGCCATATCCTTCCCGAGATCAACTTCCTC 23464 Query 47136 AGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGAT 47195 ||||||||||| || |||| ||||| || ||||| |||| ||||| |||||| ||| Sbjct 23463 GGCTGTCCAGAACGAAGCCTGAGCTTTCTTGTACATTCTCCAGATATCCGGATATTCGAT 23404 Query 47196 CGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGTATAGGTTCC 47241 ||| || | || |||| ||| || || | | || | ||||||| Sbjct 23403 CGGGAACAGCACGAATCGATTAGGGTTCTCTCGGAGCAGAGGTTCC 23358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712914696275520