Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2633 84.2 2e-11 >seq2633 Length=69334 Score = 84.2 bits (92), Expect = 2e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 16238 ATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATC 16297 ||||| |||||| ||||| || || ||||| ||||||||||| | |||||| || Sbjct 13068 ATAAGCTCGTTGCTGAAAGTCAAACCGGGCATAAGACCTCGTTTCTTGAGCCAGAAAATA 13127 Query 16298 GCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGA 16346 || || || ||||||||||| ||||||||||||| ||||| |||| Sbjct 13128 GCGGCGAAGCTTCCCGAAAAGAAAATACCCTCAACAGCAGCAAATGCGA 13176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511284890695880