Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq652 107 2e-18 >seq652 Length=419067 Score = 107 bits (118), Expect = 2e-18 Identities = 261/386 (68%), Gaps = 12/386 (3%) Strand=Plus/Minus Query 18807 TACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCAAACTATTTA 18866 ||||| ||||| ||||||||||| || || ||||| ||| | | || | | ||| | Sbjct 407430 TACGGTTTCCAATGGAGACATTTCGGCGCCGAATACGTAGA-TATGAACTA--CGATT-A 407375 Query 18867 CAGC----AAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGA 18922 ||| | || |||| ||| || | | | || || | || ||||| || || || Sbjct 407374 CAGAGGTAAGGGTGTCGACCAGTTGACCAATTTGATCGAATCCATCAAAACCAAACC-GA 407316 Query 18923 AAGCC-GACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTAC 18981 | | | || || |||| || | ||||||| || ||| | || ||||| |||| Sbjct 407315 ACGACAGAAGATTGATAATGTGCGCTTGGAACCCGTTAGATCTGCCTAAAATGGCTCTAC 407256 Query 18982 CTCCATGTCACACGTTATGTC-AGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTA 19040 |||| || ||| || ||| ||||||| || || ||||| || | || | ||| | Sbjct 407255 CTCCCTGCCACT-GTCTGGTCCAGTTTTATGTGGCCGACGGTAAACTTTCAAGTCAACTT 407197 Query 19041 TACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTT 19100 ||||||||||||| || ||||| | || |||||||| ||||| ||| || || | Sbjct 407196 TACCAGAGATCGGCCGACATGGGTTTAGGCGTACCGTTTAACATAGCTTCGTACGCCTTA 407137 Query 19101 CTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATTCATACAATG 19160 || |||||||| | || || ||||| || | ||| |||| || || | || || || Sbjct 407136 CTCACCTACATGATCGCTCACGTTACCGGCTTGAAACCCGGTGAATTTGTACACACTTTG 407077 Query 19161 GGGGATGCACATATTTACTTGAATCA 19186 || || || || | |||||||| || Sbjct 407076 GGAGACGCTCACGTCTACTTGAACCA 407051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399405359840655