Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq652 183 2e-41 >seq652 Length=419067 Score = 183 bits (202), Expect = 2e-41 Identities = 437/654 (67%), Gaps = 9/654 (1%) Strand=Plus/Plus Query 97053 AATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAA 97112 || ||| |||| || | |||||| ||||| |||||||| | |||||| || || || Sbjct 407047 AACGTGGTTCAAGTAGACGTGAGCGTCTCCCAAAGTGTGTACAAATTCACCGGGTTTCAA 407106 Query 97113 ATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCAC 97172 | || || || |||||||| | || | || | || ||| |||||||| || || Sbjct 407107 GCCGGTAACGTGAGCGATCATGTAGGTGAGTAAGGCGTACGAAGCTATGTTAAACGGTAC 407166 Query 97173 CCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACAC 97232 |||| ||||| || || ||||| || || | |||| ||||| || || || ||| Sbjct 407167 GCCTAAACCCATGTCGGCCGATCTCTGGTAAAGTTGACTTGAAAGTTTACCGTCGGCCAC 407226 Query 97233 ATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACAT 97291 ||||||||| | | ||| || ||||| || | |||||||| || | |||||| | Sbjct 407227 ATAAAACTG-GACCAGACAGTGGCAGGGAGGTAGAGCCATTTTAGGCAGATCTAACGGGT 407285 Query 97292 TCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCT 97351 ||||||| ||||| | || |||||| ||| | || || || | |||| | || | | Sbjct 407286 TCCAAGCGCACATTATCAATCTTCTGTCGTTCGGTTTGGTTTTGATGGATTCGATCAAAT 407345 Query 97352 GCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTC 97411 | || || || || || | || | |||| || || | | || ||||| || | Sbjct 407346 TGGTCAACTGGTCGACACCCTTACCTCTGTAATCGTAGTTCATATCTACGTATTCGGCGC 407405 Query 97412 CAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCA--CA 97469 | ||||| ||||||||||| || || |||||||| | || |||||||| || | | || Sbjct 407406 CGAAATGTCTCCATTGGAAACCGTACACAGGTCCCAAATCGCCTTCTTCCCTGTGAGTCA 407465 Query 97470 GAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGA 97529 | ||||| || | || ||| || | || | ||| |||| ||| || Sbjct 407466 G-TCCCAAG-GAGTCGAGGTACTCCCTCGAACTGTTACCCGACCAGATGTTCACGCCGTT 407523 Query 97530 TGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAAC 97589 | || | |||||| | || || ||| |||||||||| | |||||||| || || Sbjct 407524 TTTAGCCAACTCTTTCTCGCTTGTCGAACCTTTGATAAACCAAAGTAATTCTTCTACGAC 407583 Query 97590 ACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA---ATCCTTTTCTAAGCTGTA 97646 ||| | |||||| || |||||||| || || | ||| || | | ||||| || || | Sbjct 407584 ACCGCGCCAAAACACCCTCTTAGTAGTCAATAAAGGGAACTCACCGTTTTCCAAACTCCA 407643 Query 97647 TCTAGACTGCATTCCAAAAACACTCAATGTTCCAACTCCTGTTCTGTCGTGTTT 97700 || | ||| || || | | || ||||| || || || ||||| | ||| Sbjct 407644 CCTGGTCTGAGCGCCGAATATAGACAGGGTTCCCACACCGGTCCTGTCTTCTTT 407697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346698376754630