Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq472 102 2e-16 >seq472 Length=692712 Score = 102 bits (112), Expect = 2e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 189436 AACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCA 189495 ||| |||||| ||| |||||| | | || || ||| |||| | || ||||||||||| Sbjct 509858 AACCCATGATGATCTCTGGAACTCAGCCCAGATACAGCTGGTCAAGGAGGGAAAAATGCA 509799 Query 189496 TAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGA 189555 | ||||||| || ||||| ||||||||||||||| | || ||||| | |||||||||| Sbjct 509798 TGGTTTTTTGCGTATGTACTGGGCTAAGAAGATATTAGAGTGGACCACTTCACCTGAAGA 509739 Query 189556 CGCTTT 189561 || || Sbjct 509738 GGCCTT 509733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922963011950360