Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq652 150 1e-31 >seq652 Length=419067 Score = 150 bits (166), Expect = 1e-31 Identities = 372/562 (66%), Gaps = 2/562 (0%) Strand=Plus/Minus Query 20040 TGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATT 20099 ||| || || ||||| ||||| || |||| |||||| || || || ||||| ||| | Sbjct 407626 TGAGTTCCCTTTATTGACTACTAAGAGGGTGTTTTGGCGCGGTGTCGTAGAAGAATTACT 407567 Query 20100 ATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTG 20159 |||||||| ||||| || |||| | ||| | | |||| || || || || || Sbjct 407566 TTGGTTTATCAAAGGTTCGACAAGCGAGAAAGAGTTGGCTAAAAACGGCGTGAACATCTG 407507 Query 20160 GAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAGG 20218 | | | | || | | | | | || | ||| | ||| || | |||| | Sbjct 407506 GTCGGGTAACAGTTCGAGGGAGTACCTCGACTCCTTGGGACT-GACTCACAGGGAAGAAG 407448 Query 20219 GGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACA 20278 | |||||||| |||||||| || || |||||||||||||| || || ||||| || || | Sbjct 407447 GCGATTTGGGACCTGTGTACGGTTTCCAATGGAGACATTTCGGCGCCGAATACGTAGATA 407388 Query 20279 TGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTA 20338 ||||| |||| || | || || || || || ||| | || | | || | Sbjct 407387 TGAACTACGATTACAGAGGTAAGGGTGTCGACCAGTTGACCAATTTGATCGAATCCATCA 407328 Query 20339 AAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTT 20398 |||| || || |||||||||||| | || | ||||| |||||| | |||| ||||| Sbjct 407327 AAACCAAACCGAACGACAGAAGATTGATAATGTGCGCTTGGAACCCGTTAGATCTGCCTA 407268 Query 20399 TAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGT 20458 ||||||| | ||||| || || || ||| ||||| || || | | || | | Sbjct 407267 AAATGGCTCTACCTCCCTGCCACTGTCTGGTCCAGTTTTATGTGGCCGACGGTAAACTTT 407208 Query 20459 CGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAA 20518 | ||||| | || || |||| || || ||||| | || || || || || || || Sbjct 407207 CAAGTCAACTTTACCAGAGATCGGCCGACATGGGTTTAGGCGTACCGTTTAACATAGCTT 407148 Query 20519 GTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAG 20578 || || | || || || ||||| || || ||||| | || ||| | ||||| || | Sbjct 407147 CGTACGCCTTACTCACCTACATGATCGCTCACGTTACCGGCTTGAAACCCGGTGAATTTG 407088 Query 20579 TCCACACCATAGGAGACGCGCA 20600 | ||||| | |||||||| || Sbjct 407087 TACACACTTTGGGAGACGCTCA 407066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399085438850755