Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1037 91.5 1e-13 seq223 86.0 5e-12 >seq1037 Length=250510 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 || || || ||||||||||| | | || | || |||| |||| |||||| || || || Sbjct 84451 TCTTTTTGGATGTTGTAGTCTGATAAGGTA-CGGCCGTCTTCCAATTGTTTACCAGCAAA 84393 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||||| ||| || || ||||| | ||| ||||| ||| || || |||||| Sbjct 84392 GATCAACCTCTGCTGATCTGGAGGGATACCTTCCTTATCCTGGATCTTAGCCTTAACATT 84333 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| | || || || | ||| || |||||||| |||||||| || || Sbjct 84332 CTCGATTGTGTCTGATGCTTCTACTTCAAGGGTGATGGTCTTGCCGGTCAGAGTTTTAAC 84273 Query 45325 AAAGATTTGCAT 45336 |||||||||||| Sbjct 84272 AAAGATTTGCAT 84261 >seq223 Length=534358 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/207 (70%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 |||||||||||||||||||| ||| || | || || || ||||| || ||||| | Sbjct 233335 CCTTCTGAATGTTGTAGTCGGAGAGTGTACGGCCATCTTCAAGCTGTTTGCCAGCGAAGA 233276 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 | | ||||| || || ||||| | ||||||||||| || || ||| || | Sbjct 233275 TAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTCACATTCT 233216 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | | || | ||| ||||| | || || ||||| ||||| || ||||| || | Sbjct 233215 CGATGGTATCTGAAGGCTCGACCTCGAGAGTGATGGTCTTACCCGTTAGGGTCTTAACGA 233156 Query 45327 AGATTTGCATGTTGCCT-CAATACACA 45352 |||| ||||| ||| || ||| | ||| Sbjct 233155 AGATCTGCATCTTGTCTGCAAAATACA 233129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394977653340439