Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq652 91.5 3e-13 >seq652 Length=419067 Score = 91.5 bits (100), Expect = 3e-13 Identities = 213/314 (68%), Gaps = 8/314 (3%) Strand=Plus/Minus Query 35392 AGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATG- 35450 ||| || ||||||||||| || ||||| ||||||||| | ||||| || || ||||| | Sbjct 407452 AGAAGGCGATTTGGGACCTGTGTACGGTTTCCAATGGAGACATTTCGGCGCCGAATACGT 407393 Query 35451 ATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGA 35510 | | || | | |||||| | || |||||| | || || ||| ||||| | | | Sbjct 407392 AGATATGAAC-TACGATTACAGAGGTAAGGGTGTCGACCAGTTGACCAATTTGATCGAAT 407334 Query 35511 CCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATC 35570 || | | | || || | || ||||| |||| ||| || ||||| || | |||| Sbjct 407333 CCATCAAAACCAAACCGAACGACAGAAGATTGATAATGTGCGCTTGGAACCCGTTAGATC 407274 Query 35571 TTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCT-CAATTTTATGTGGCTAATGGA 35629 | | |||||||| ||||| |||||| || ||| | || ||||||||||| | || Sbjct 407273 TGCCTAAAATGGCTCTACCTCCCTGCCAC-TGTCTGGTCCAGTTTTATGTGGCCGACGGT 407215 Query 35630 GAATTGTCGTGCCAGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCA 35687 || | || | || | || ||| || || || ||| || || ||||| || || | Sbjct 407214 AAACTTTCAAGTCAACTTTACCAGAGATCGGCCGACATG--GGTTTAGGCGTACCGTTTA 407157 Query 35688 ATATTGCATCATAC 35701 | || || || ||| Sbjct 407156 ACATAGCTTCGTAC 407143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989327135227345