Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq652 149 5e-31 >seq652 Length=419067 Score = 149 bits (164), Expect = 5e-31 Identities = 276/405 (68%), Gaps = 0/405 (0%) Strand=Plus/Plus Query 20933 AACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAG 20992 ||||||||| ||| ||||| ||||| ||||| ||||| ||||| || || || ||| Sbjct 407047 AACGTGGTTCAAGTAGACGTGAGCGTCTCCCAAAGTGTGTACAAATTCACCGGGTTTCAA 407106 Query 20993 GCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGAC 21052 ||| || ||||||||||||| || || || | |||||| || ||||||||||| || Sbjct 407107 GCCGGTAACGTGAGCGATCATGTAGGTGAGTAAGGCGTACGAAGCTATGTTAAACGGTAC 407166 Query 21053 CCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCAC 21112 || | ||||||||||| || |||||||| || || | || || | || ||||| Sbjct 407167 GCCTAAACCCATGTCGGCCGATCTCTGGTAAAGTTGACTTGAAAGTTTACCGTCGGCCAC 407226 Query 21113 GTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTT 21172 |||||||| || | ||| || ||||| |||||||| | || || ||||| Sbjct 407227 ATAAAACTGGACCAGACAGTGGCAGGGAGGTAGAGCCATTTTAGGCAGATCTAACGGGTT 407286 Query 21173 CCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCACGTA 21232 ||| |||||||| | | | | |||| || | || || || | || | Sbjct 407287 CCAAGCGCACATTATCAATCTTCTGTCGTTCGGTTTGGTTTTGATGGATTCGATCAAATT 407346 Query 21233 ACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCC 21292 || |||||| || |||| ||| ||| | | || | ||| || || || Sbjct 407347 GGTCAACTGGTCGACACCCTTACCTCTGTAATCGTAGTTCATATCTACGTATTCGGCGCC 407406 Query 21293 AAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTC 21337 ||||||||||| ||||| |||||||| || |||| |||||| || Sbjct 407407 GAAATGTCTCCATTGGAAACCGTACACAGGTCCCAAATCGCCTTC 407451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427670379298320