Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1037 93.3 3e-14 >seq1037 Length=250510 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || ||||| | |||||| || ||||| || || |||| || ||||||||||||||||| Sbjct 80844 TCTTTTTGGATATTGTAGTCTGACAAAGTGCGGCCGTCTTCTAATTGTTTGCCGGCAAAG 80785 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 ||||| | || ||||| | || | |||||| || || |||| | || || | Sbjct 80784 ATCAACCTTTGCTGATCTGGAGGGATACCTTCCTTATCCTGGATCTTAGCCTTTACATTC 80725 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| || || | ||| || || | || ||||| || || || || ||||||||| Sbjct 80724 TCAATTGAATCAGAGGGCTCTACTTCAAGGGTGATAGTCTTGCCAGTAAGGGTTTTCACA 80665 Query 43099 AAAATTTGCAT 43109 || |||||||| Sbjct 80664 AAGATTTGCAT 80654 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || ||||| | ||||| || || || ||||| |||| ||||||||||| || ||||| Sbjct 84451 TCTTTTTGGATGTTGTAGTCTGATAAGGTACGGCCGTCTTCCAATTGTTTACCAGCAAAG 84392 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 ||||| | ||| ||||| | || | |||||| || || |||| | || || | Sbjct 84391 ATCAACCTCTGCTGATCTGGAGGGATACCTTCCTTATCCTGGATCTTAGCCTTAACATTC 84332 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 | | |||||| || || || || | || || || || ||||| |||||||| ||| Sbjct 84331 TCGATTGTGTCTGATGCTTCTACTTCAAGGGTGATGGTCTTGCCGGTCAGAGTTTTAACA 84272 Query 43099 AAAATTTGCAT 43109 || |||||||| Sbjct 84271 AAGATTTGCAT 84261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381275437343022