Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq652 172 4e-38 >seq652 Length=419067 Score = 172 bits (190), Expect = 4e-38 Identities = 292/417 (70%), Gaps = 7/417 (2%) Strand=Plus/Plus Query 25434 ACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGC 25493 ||||| | || |||||||||||||||||||| |||||| ||||| || || |||| | Sbjct 407048 ACGTGGTTCAAGTAGACGTGAGCGTCTCCCAAAGTGTGTACAAATTCACCGGGTTTCAAG 407107 Query 25494 CCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACC 25553 |||||||||| ||| |||||||| ||||| | ||| || |||||||| ||||| Sbjct 407108 CCGGTAACGTGAGCGATCATGTAGGTGAGTAAGGCGTACGAAGCTATGTTAAACGGTACG 407167 Query 25554 CCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCAC 25613 || || ||||||| | |||| |||||||| || |||| || || | ||||| ||| Sbjct 407168 CCTAAACCCATGT-CGGCCGATCTCTGGTAAAGTTGACTTGAAAGTTTACCGTCGGCCAC 407226 Query 25614 GTAAAACTGACACATGGTGTAGCACGGAGGAAGAGC--TATAAGGCCCAAGTCTTTAGGG 25671 |||||||| || || ||| ||||| ||||| | | ||| || ||| ||| Sbjct 407227 ATAAAACTGGACCAGACAGTGGCAGGGAGGTAGAGCCATTTTAGG--CAGATCTAACGGG 407284 Query 25672 TTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTG 25731 ||||| ||||||| || | | ||||| | || ||| |||| ||| || Sbjct 407285 TTCCAAGCGCACATTATCAATCTTCTGTCGTTCGGTTTGGTTTTGAT-GGATTCGATCAA 407343 Query 25732 TTTTG-CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGC 25790 || | || ||| || || ||| | || ||| || |||| || ||| || || Sbjct 407344 ATTGGTCAACTGGTCGACACCCTTACCTCTGTAATCGTAGTTCATATCTACGTATTCGGC 407403 Query 25791 TCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTG 25847 ||||||| ||||| ||||| |||||||| ||||| | || || ||||||||||| Sbjct 407404 GCCGAAATGTCTCCATTGGAAACCGTACACAGGTCCCAAATCGCCTTCTTCCCTGTG 407460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340053617794407