Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq1822 120 3e-22 >seq1822 Length=724184 Score = 120 bits (132), Expect = 3e-22 Identities = 208/298 (70%), Gaps = 6/298 (2%) Strand=Plus/Minus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||| |||||||| ||||| |||| || |||| | | || || ||| || ||| Sbjct 297863 CCATGAGTTAAATGTCCACCACAATTCAGTGACAATCCAAGTATTGTATCACCCGGAACA 297804 Query 6986 AGCAACGCATGGTAAACA--GCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTG 7043 || | | | | ||||| ||||| |||||||| ||||| || || ||||||||||||| Sbjct 297803 AGTAGTGAA--GCAAACACTGCTTGATTTGCCTGAGAACCAGAGTGAGGTTGAACGTTTG 297746 Query 7044 CGAAATTGCAACTAAACAG-TTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCG 7102 | || || || |||||| || ||| | || || ||||| || || | ||||| Sbjct 297745 CAAATTTAACACCAAACAGCTTACAAAGC-CTTTCTATAGCCAGATTTTCAACTTCATCT 297687 Query 7103 GCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTA 7162 | | |||| || | |||||| | ||| || ||||| || || ||||| || || || Sbjct 297686 ACATACTCACAGCCACAGTAATATCTTTTACCAGGATAACCTTCTGCATATTTATTAGTC 297627 Query 7163 AAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCA 7220 | || ||||||||| |||| ||| || | | || | ||||| |||||||||| Sbjct 297626 AGAAAAGAACCTTGTGCTTCCATCACTGCTTTACTTGCAAAATTTTCCGATGCAATCA 297569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553213470117720