Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq418 89.7 6e-13 >seq418 Length=454494 Score = 89.7 bits (98), Expect = 6e-13 Identities = 143/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 126182 TGTAAA--TGTAGCGGGGAGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTG 126239 |||||| |||| | ||||| || |||||||||||||| | | || ||||||||||| Sbjct 396142 TGTAAAGATGTATCTGGGAGAGGCTGAATCCTTGCCTCCTTGTAGCCTTGTGCCAAACTG 396201 Query 126240 ACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGAC 126299 |||| || | | ||| | | |||||| | || ||||||| ||| || || |||| Sbjct 396202 ACCGATGGGTTGTAGCAAGTTGATATTGTTTGAGCCGACAAAGTTCTGTGCCAAGTTGAT 396261 Query 126300 AATGGTCTCGCACAGGTTCTGC-TCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGC 126358 |||||| || || | | | |||||||| | |||| | | || |||||||| | Sbjct 396262 AATGGT-TCCCATAAGAGAGACTTCGCCGTGATGGTAGGCCGAGTGTTCGGCCACACTAC 396320 Query 126359 CGCTCAGCTGCGCAACCTTGAT 126380 || |||||||| || ||||| Sbjct 396321 CGGCAAGCTGCGCCACTTTGAT 396342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611237172618400