Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq830 125 2e-25 >seq830 Length=358315 Score = 125 bits (138), Expect = 2e-25 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||||||| ||||| ||||| | | || |||||| || |||||||||||||||| Sbjct 51776 ACCCCATGTCACGAGTGTTTCCTAAGGTAACCAAATGTACCTTCCACAAATACGGTCCTT 51717 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 |||| || || | || | ||| ||||||||| || | ||| ||| | |||||||||| Sbjct 51716 CGGGAACCGTGCAGAAGTTCGACGGACTCTGCGTCTTGCCGTTGAATATCGTCAACGAGA 51657 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||||| ||||||| |||||||||||| Sbjct 51656 AGATCTACGTTTTCCTGTGGTTCTGGTTC 51628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12477234646500