Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2633 89.7 1e-12 >seq2633 Length=69334 Score = 89.7 bits (98), Expect = 1e-12 Identities = 158/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 || ||||| ||||| ||||| | ||| | ||| ||||| || ||||| || || Sbjct 13276 CTATTCAATGCCATTGAGACTCTAGATTGCGTTAAGCGCAAGGCAGATTGGGCTCTAGAC 13217 Query 42669 TGGATCGAGAGTCCCGAC-GCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 ||||||| || | || || || ||||| || ||| | || || ||| | || || || Sbjct 13216 TGGATCGGCAG-CGATACAGCTACTTTCGGTGAAAGGGTCGTCGCATTTGCTGCTGTTGA 13158 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAG-CAGAAGGTGTCGA 42786 ||| || ||||| ||||| ||||||| | || |||||||||||| | |||| | | Sbjct 13157 GGGTATTTTCTTTTCGGGAAGCTTCGCCGCTATTTTCTGGCTCAAGAAACGAGGTCT-TA 13099 Query 42787 TGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 ||||||| | || ||| ||||| || || |||||||||| Sbjct 13098 TGCCCGGTTTGACTTTCAGCAACGAGCTTATTTCAAGGGACGAGG 13054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944100057901840