Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq652 197 1e-45 >seq652 Length=419067 Score = 197 bits (218), Expect = 1e-45 Identities = 426/634 (67%), Gaps = 5/634 (1%) Strand=Plus/Plus Query 20191 GTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATG 20250 ||||| ||| || |||||||| ||||| | ||| || |||||| | | || ||||| || Sbjct 407059 GTAGACGTGAGCGTCTCCCAAAGTGTGTACAAATTCACCGGGTTTCAAGCCGGTAACGTG 407118 Query 20251 AGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCAT 20310 ||| | ||| || || | | || || || |||||||| || || || |||||||| Sbjct 407119 AGCGATCATGTAGGTGAGTAAGGCGTACGAAGCTATGTTAAACGGTACGCCTAAACCCAT 407178 Query 20311 GTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAA-TTGAC 20369 ||| |||| ||||| || || |||| ||||| | |||||| || |||||||| | ||| Sbjct 407179 GTCGGCCGATCTCTGGTAAAGTTGACTTGAAAGTTTACCGTCGGCCACATAAAACTGGAC 407238 Query 20370 ATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACA 20429 || |||| ||||| || || ||||| | || || ||||||||| || |||| Sbjct 407239 CAGAC-AGTGGCAGGGAGGTAGAGCCATTTTAGGCAGATCTAACGGGTTCCAAGCGCACA 407297 Query 20430 TAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGT 20489 | || | |||||| |||| ||| || |||| || | || | | | | ||| |||| Sbjct 407298 TTATCAATCTTCTGTCGTTCGGTTTGGTTTTGATGGATTCGATCAAATTGGTCAACTGGT 407357 Query 20490 CAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCC 20549 | | |||| ||| | || || | | || ||||| | || || || || |||| Sbjct 407358 CGACACCCTTACCTCTGTAATCGTAGTTCATATCTACGTATTCGGCGCCGAAATGTCTCC 407417 Query 20550 ACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGG 20609 | ||||||||||| |||||||||||||| || || ||||| | ||| || | Sbjct 407418 ATTGGAAACCGTACACAGGTCCCAAATCGCCTTCTTCCCTGTGAGTCAGTCCCAAGGAGT 407477 Query 20610 CCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGCTCCC 20669 | ||| ||||||| || | || ||| || || || || || | | | ||| Sbjct 407478 CGAGGTACTCCCTCGAACTGTTACCCGACCAGATGTTCACGCCGTTTTTAGCCAACTCTT 407537 Query 20670 TGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACA 20729 | | || || || | ||||||||| | |||| || || || |||||||||| Sbjct 407538 TCTCGCTTGTCGAACCTTTGATAAACCAAAGTAATTCTTCTACGACACCGCGCCAAAACA 407597 Query 20730 CCCGCTTTGTGGTTAGTAAGGGAAAGT---GGTCCCGCAGACTATACCTGGCCTGCATGC 20786 ||| ||| || || | ||| || || | || || ||| |||||| ||| || Sbjct 407598 CCCTCTTAGTAGTCAATAAAGGGAACTCACCGTTTTCCAAACTCCACCTGGTCTGAGCGC 407657 Query 20787 CAAATAGAGAGAGGGTGCCTATGCCGGTGCGGTC 20820 | |||| ||| ||||| || | ||||| | ||| Sbjct 407658 CGAATATAGACAGGGTTCCCACACCGGTCCTGTC 407691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441261027855560