Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq418 86.0 7e-12 seq176 82.4 9e-11 >seq418 Length=454494 Score = 86.0 bits (94), Expect = 7e-12 Identities = 151/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 171873 TGAGTTTTGTGAAGATGTACCTCGTTTGAGACGC---ATCTTTGCCACCCATGAGACGCG 171929 |||| |||| |||||||| || | |||| || ||| ||||| || || | | Sbjct 396135 TGAGCATTGTAAAGATGTATCTGG---GAGAGGCTGAATCCTTGCCTCCTTGTAGCCTTG 396191 Query 171930 TCCCAAATTGACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGG 171989 | ||||| ||||| |||| || | |||||||||||||| || | ||| | | Sbjct 396192 TGCCAAACTGACCGATGGGTTGTAGCAAGTTGATATTGTTTGAGCCGACAAAGTTCTGTG 396251 Query 171990 CCAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCG 172049 |||| |||| ||| || || || |||||||| ||||||||||||||||| | || | Sbjct 396252 CCAAGTTGATAATGGTTCCCATAAGAGAGACTTCGCCGTGATGGTAGGCCGAGTGTTCGG 396311 Query 172050 CGACA-TACGCCGCCAACTGTGCCACCTTCATCTCA 172084 | ||| ||| | || | ||| ||||| || || ||| Sbjct 396312 CCACACTAC-CGGCAAGCTGCGCCACTTTGATTTCA 396346 >seq176 Length=640401 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 ||||| ||||||||||| | || || || |||||||||| |||||||| ||| || Sbjct 534029 ATTTCAGTACACAAATTGCTGCATTTGATAGTTCCCAAGTTCTGCTGATTTGATTTTCTG 534088 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 ||||| ||||| ||||| ||||| ||||| || || || |||| || | || ||| Sbjct 534089 TTACAAGCATCTTTGTACAGCATATATGGAACACCTGTTTCAATTTGTGAATCGATTATA 534148 Query 114644 GCCTTCCA 114651 || |||| Sbjct 534149 GCACTCCA 534156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597202327667720