Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3464 98.7 1e-15 >seq3464 Length=263656 Score = 98.7 bits (108), Expect = 1e-15 Identities = 261/389 (67%), Gaps = 20/389 (5%) Strand=Plus/Plus Query 11496 AATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTT 11555 ||||| |||||||||||||| || | ||||| || ||| || | || |||||| Sbjct 125792 AATCTGTCGATCGAAACGACCAGGTCTAAGTAGCGCTGGATCTAGCACGTCTGGACGGTT 125851 Query 11556 TGTAGCGGCAATGACTACAATGCCAGTCTCATT---GTCGAAACCGTCCATTTCTGTGAG 11612 || || ||| |||| || || ||||| |||||||| ||||| || || Sbjct 125852 AGTTGCAGCA---ACTATTATCACACCTTCATTAGACTCGAAACCATCCATCTCAACCAG 125908 Query 11613 AAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGC-----ATACCACCTGCCGAA 11667 | |||||| | || ||||| | || ||||| | || | |||| ||||| Sbjct 125909 TAACTGGTTTAATGTTTGTTCCCTTTCGTCGTT--ACCGCCACCAAGACCA-ATGCCG-- 125963 Query 11668 CGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGT 11727 || | | |||| || || || || || || ||||| | ||||| || | | | | Sbjct 125964 CGATGCCTACCTACTGCATCTATTTCGTCTATGAAAATTATACAAGG-AGCATTTTTCTT 126022 Query 11728 GCC-TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAA 11786 ||| || || || | || || ||||| | || |||||||| || ||||| |||||||| Sbjct 126023 GCCTTGATCAAACATATCCCGGACACGGCTTGCACCAACACCGACAAACATTTCAACGAA 126082 Query 11787 GTTTGCGGCAG-AACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGA 11845 | | ||| || ||| || || || ||||||| ||||| || || || ||||| | Sbjct 126083 ATCAGATCCAGAAATACT-AAAAAACGGTACATTAGCTTCACCTGCAATTGCACGAGCAA 126141 Query 11846 GGAGAGTCTTACCCGTACCAGGTGCACCA 11874 | ||||| ||||| || ||||| | |||| Sbjct 126142 GTAGAGTTTTACCAGTTCCAGGGGAACCA 126170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588826849190200