Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq4088 91.5 2e-13 seq2460 86.0 7e-12 >seq4088 Length=31078 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 158569 GCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGT 158628 || |||||| | || || || || | || || |||||||||||||| || || || ||| Sbjct 7697 GCCTACAGACTTGCTCTTCAAACCCGTGAACAACATATCAGAAGAGATAAGGCTACAAGT 7638 Query 158629 AACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCAT 158688 || ||||||||||||||||| ||| |||| ||||| | | || |||| |||||| Sbjct 7637 AATATCTGCACAGCACAAGCTCTGTTGGCAAATATCAGCGCAATGTACGCAGTCTATCAT 7578 Query 158689 GGTGCAGATGGACTA 158703 || || | |||||| Sbjct 7577 GGACCACAAGGACTA 7563 >seq2460 Length=121240 Score = 86.0 bits (94), Expect = 7e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 159630 TCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGA 159689 |||||||||| | |||||||||||| | || || || || ||||| ||| | | Sbjct 11434 TCAGGTATATTTAGATGGTGCAAATATGAACGCTCAAGTTGGTCTCTGTTGCCCAGGACA 11493 Query 159690 CTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGG 159749 |||||| | ||||||| ||||| || | || || |||||||| || || || ||||| Sbjct 11494 CTATGGGTCTGATGTATCACATCTTAATCTTCACAAAACATTCTGCATCCCTCACGGAGG 11553 Query 159750 TGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || || || ||| | || |||||||| || Sbjct 11554 AGGTGGCCCCGGCATGGGACCTATTGGAGT 11583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587902283384240