Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_015937.1 Length=151483 Score E Sequences producing significant alignments: (Bits) Value seq1822 93.3 4e-14 >seq1822 Length=724184 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/215 (70%), Gaps = 12/215 (6%) Strand=Plus/Plus Query 11939 AATTTAGCCTTTCTCATTGGAGGAGCAAACTTAtttttttCTACTTTTATATGAACCTCA 11998 ||||| || | ||| | ||||||||||| ||||||||| | ||||| | ||| Sbjct 577719 AATTTTGCTTCTCTAAATGGAGGAGCAACTTTATTTTTTACAACTTTAACTCTCGTTTCA 577778 Query 11999 TCTCC------AATCTCTCCATCCTCGTCTTTTATTGGCTTTTTGCGCATATTAAGTCTA 12052 | || | ||||| ||||| | || || ||||| | |||| |||||| Sbjct 577779 TTACCCGTAATATTCTCTTTATCCTT-TATTGTACCAACTTTT--CTTATATCAAGTCTT 577835 Query 12053 AGAGATGAAAAGAATTTTAATGCCCTACCACCTGGTGTTGTTTCCGGGTTTCCATA---A 12109 | ||| | | ||||||||||||| | ||||| | || ||||| || |||||||| Sbjct 577836 ATAGAAGTATAGAATTTTAATGCATTTCCACCGGTGGTAGTTTCAGGATTTCCATATACT 577895 Query 12110 ACTCCTATTTTTTCACGAATTTGGTTGATAAACAT 12144 ||||||||||| |||||||||||||||||| || Sbjct 577896 ACTCCTATTTTCATACGAATTTGGTTGATAAATAT 577930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484494876650520