Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2633 105 8e-18 >seq2633 Length=69334 Score = 105 bits (116), Expect = 8e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 || || |||||||| |||| |||||||| || || | ||| || |||||||| ||| Sbjct 18496 ATGTATGTATCAATAAGTAGCGAGTACATTTCGGAATGGACATTCTCCATAGCTATTTGA 18555 Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565 || ||||| |||||||| ||||| | | ||||| || | | ||||| | | | | Sbjct 18556 AATCCATAGAAACACCTCGCTTCCGTAACCTGAACCTCTTGACTGAACCTTTCTACAAGG 18615 Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACAT 37611 ||||||||||| || ||||| ||| || |||||||| ||||||| Sbjct 18616 TTTTCATTAACGATTCCATCCGAAGCAGCGAAGAAAGCGAGAACAT 18661 Score = 84.2 bits (92), Expect = 3e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 37227 AAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCA 37286 || || || || ||||| | ||||| ||| || | ||| || || || || || ||| Sbjct 13083 AAAGTCAAACCGGGCATAAGACCTCGTTTCTTGAGCCAGAAAATAGCGGCGAAGCTTCCC 13142 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 |||||||||||||| ||||| || |||||||| || | | | ||||||||| | || Sbjct 13143 GAAAAGAAAATACCCTCAACAGCAGCAAATGCGACGACCCTTTCACCGAAAGTAGCTGTA 13202 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 | ||||| | | | |||||||||||| ||||| || || | || ||| Sbjct 13203 TCGCTGCCGATCCAGTCTAGAGCCCAATCTGCCTTGCGCTTAACGCAATCTAGAGTCTCA 13262 Query 37407 ATTGCTTTTAAGAGAAAGT 37425 || || || || ||||||| Sbjct 13263 ATGGCATTGAATAGAAAGT 13281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592166803174360