Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq2352 87.8 2e-12 >seq2352 Length=171728 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 197077 TTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACC 197136 ||||| |||| |||||||| | || || | || || || || ||||| || Sbjct 22850 TTGTCAGGATCATAACAGGCTAATAGAAATCCTCCATACAAGCCAGTCCTCTTGCCTTTA 22791 Query 197137 CCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCT 197196 || | | || || ||||| |||| ||| | | | || | || |||||||| |||||| Sbjct 22790 CCTAAGTATCCACCTATAACTACCACATCAATACTATCACCTACACCTTCCATATAATCT 22731 Query 197197 TTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCC 197256 ||||| || || |||||| ||| ||| |||||||| || || || || || | | ||| Sbjct 22730 TTCTTTAGCTTAAGCCAGTTTCGAGACCTCTTGGCTATTTCATAAGTAGCCTCCTCTTCC 22671 Query 197257 AGGGTCTTGATCATCAATCCCTCGCA 197282 | || || | ||||| |||||| || Sbjct 22670 AATGTTTTAACCATCAGTCCCTCACA 22645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676558226687920