Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2721 84.2 2e-11 >seq2721 Length=101127 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| |||||| | || || ||| |||||| |||||||| ||||| ||| Sbjct 40698 CCACCCCTAAGCCTCAACACAAGGTGAAGTGTGGACTCTTTCTGAATATTATAATCTGAT 40757 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | ||| | || || | |||||||||||||| |||| || ||| ||||| | ||| Sbjct 40758 AAGGTGCGACCATCCTCAAGTTGCTTACCGGCAAAGATCAATCTCTGCTGATCAGGAGGA 40817 Query 48660 A 48660 | Sbjct 40818 A 40818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380843544006657