Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq176 98.7 2e-15 >seq176 Length=640401 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 |||||||| |||||||| | ||| | || || || | |||||| || || || ||| Sbjct 536990 GGACACATAAGACTCCACTTTCCGTTCTTTTCCACTCTTTCCATGAATAGATCGGGAATC 537049 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 |||| || | ||| ||||||| | |||| || || ||| |||| ||| ||| Sbjct 537050 CACAAGGCGTAAAACAGATCTCGTGCCCGCACTTCTTCTTTACCGGTGTTCTTCTTCAAG 537109 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 || | ||| ||||| | |||||||||||||||||| || |||| ||| | || || ||| Sbjct 537110 TCAAGAAATTCAAATACGTCAGCGTGCCACGGCTCAAGGTAGATGGCGAATGCACCAGGT 537169 Query 222179 CGCT 222182 | || Sbjct 537170 CTCT 537173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928609581664960