Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq450 113 4e-20 >seq450 Length=495809 Score = 113 bits (124), Expect = 4e-20 Identities = 197/284 (69%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 || || ||||| |||||| | ||||| |||||||| | | || | ||||| | Sbjct 140255 GGAGGATTTTTAAGTATGTAAGTGTTCAGCTTATGGTTGGCCTCAAGAGGACCGTGGAAG 140314 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTC--TTTTTAGC-GGACACGATGAGCTCA 34320 || || ||||||||||| || | | ||| || ||| | || | || | || | Sbjct 140315 CCACAGGCTTTGCAGCCTTG---GTTGATGGTCATTTTCTTGCAGTTGACTAAAAGATTG 140371 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| || || |||||||| || || | ||||| ||||||||| |||||||| | | Sbjct 140372 GTCTCAGGATTTTCACATTCTGGGCAAAGGACAAAGCGGCGGATGAATCCATCAAGTAAG 140431 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | || | | ||||| || || || |||||||||| ||||| || |||| Sbjct 140432 TCCTGAAGTTTGGCAGCCTCGTGTGATCCATTCACGATGAATCTGTCGTTCTTAAAATCA 140491 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 | ||| || || || || ||||| || || || || || ||||| Sbjct 140492 AACTGAGTCTGGGCTCCAAGCTCACAACCAAAATATTTAGTCGG 140535 Score = 111 bits (122), Expect = 1e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 34490 TGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 |||| ||||| |||| || || || ||||| |||||| || || ||||| ||||||| Sbjct 142711 TGGCAGGACGACCAATGGCTTTAGCAATTTCAATCATGTTTACAATAACAGTTTTGATGC 142770 Query 34550 CGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGT 34609 ||||||| || |||||||| || || | || ||||| |||||||||||||| || | Sbjct 142771 CGTTGCCTTTGCCTTCGACTTTAGCAATAAGCCGAGGCATCTTGTAGCGGTAGAAAGCAT 142830 Query 34610 CCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | | || | ||||||||||| ||| | ||||| Sbjct 142831 CGGAGACGCTCCGGTTAACGTTGACACTTCCCAT 142864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412739666699687