Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3720 95.1 2e-13 seq2615 91.5 2e-12 >seq3720 Length=52068 Score = 95.1 bits (104), Expect = 2e-13 Identities = 168/243 (69%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| ||||||||||| || || || |||||| ||||||| || || | | Sbjct 38340 TGTACTTGGTAACGGCCTTGGTGCCTTCACTTACAGCGTGCTTGGCCAGCTCACCAGGGA 38281 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 | ||| | |||||| || || || || || || ||| || ||||||| |||| Sbjct 38280 GAAGCAGCCTCACGGCCGTTTGAATTTCCCGACTGGTGATGGTTGACCGCTTGTTGTAGT 38221 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | | | || || || |||| | ||||| |||| | |||||| ||||| | ||| Sbjct 38220 GAGAG--AGACGAGACGCTTCGGCTGCAATGCGCTCGAATAAGTCGTTCACAAAGGTGTT 38163 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||| | || |||| || ||| ||||| || |||||||| ||||| Sbjct 38162 CATGATGCTCATAGCCTTTGAAGAGACTCCGGTGTCAGGGTGAACTTGCTTGAGTACCTT 38103 Query 1485708 GTA 1485710 ||| Sbjct 38102 GTA 38100 >seq2615 Length=66887 Score = 91.5 bits (100), Expect = 2e-12 Identities = 166/241 (69%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 |||||||| || ||||||||||| || ||| |||||| | |||| || || | | Sbjct 1342 TACTTGGTAACAGCCTTGGTACCTTCACTGACAGCGTGCTTAGCCAACTCACCAGGGAGA 1283 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGTGC 1485589 | ||| | |||||| ||||| || || ||| || ||| || ||||||| ||||| Sbjct 1282 AGCAGCCTCACGGCTGTCTGAATTTCCCGGCTGGTGATGGTAGATCGCTTGTTGTAGTGA 1223 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | | || || || |||| | ||||| |||| | ||||| || || ||||| Sbjct 1222 GAG--AGACGAGATGCTTCGGCAGCAATGCGCTCGAATAAATCGTTCACGAAACTGTTCA 1165 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||| || ||| ||||| || |||||||| ||||||| Sbjct 1164 TGATACTCATAGCTTTAGAGGAGACACCGGTGTCCGGGTGAACTTGCTTGAGTACCTTGT 1105 Query 1485710 A 1485710 | Sbjct 1104 A 1104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914091357768701