Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_024329.1 Length=39425 Score E Sequences producing significant alignments: (Bits) Value seq1822 84.2 6e-12 >seq1822 Length=724184 Score = 84.2 bits (92), Expect = 6e-12 Identities = 144/208 (69%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 14746 CAACTGGTGGTGATGCTAATAGAAAAGCATTAAATATTCATAATGCTG---TTGTTATTA 14802 ||||||||||||| | ||| | |||||||||||||| ||| |||||| | || | Sbjct 160090 CAACTGGTGGTGACCCAAATCGCAAAGCATTAAATATACATCATGCTGTAATAGTAACAG 160149 Query 14803 ATCAAGCCTTTTTAAATGCAGTTAGATATGATGAAAGCTGGTATTTAATTAACCCAGATA 14862 || || ||| | | || ||| | ||||| || ||| ||||||| | ||| ||| Sbjct 160150 ATAAA---TTTATGCAAGCTGTTGAAGATGATCAAGAATGGGATTTAATAAGCCCTCATA 160206 Query 14863 GTAATGATGTGGTAGATAAAGTAATTGCTCGTGATTTATATAAACAAATCTTAACAACAA 14922 |||| | || | | ||||| || || ||| ||| | |||| |||||| ||| Sbjct 160207 ATAATAAAGTTATTTCAACAGTAAAAGCACGGGATATATGGATTAAAATATTAACAGCAA 160266 Query 14923 GACACCAAACTGGTGAGCCTTATATTAT 14950 || ||||||| || ||||||||||| Sbjct 160267 GAATTGAAACTGGAGAACCTTATATTAT 160294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126008078233146