Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq1037 98.7 8e-16 >seq1037 Length=250510 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| |||||||||||| |||| ||||||||||| ||| | ||| ||| ||| Sbjct 81316 ATGCAAATCTTTGTTAAAACACTGACCGGCAAGACCATCACCCTTGAAGTAGAGCCCTCT 81375 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || ||| ||| | || || || || || || ||||| | || ||||| Sbjct 81376 GACTCTATTGAAAATGTTAAGGCTAAGATCCAGGATAAGGAAGGTATCCCTCCAGATCAG 81435 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||| | || | ||| || ||||| ||||||||| | || || || |||||| Sbjct 81436 CAGAGGTTGATCTTTGCCGGTAAACAGTTAGAAGATGGTCGTACCTTGTCAGACTACAAC 81495 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| |||||||| || ||| | || | ||| | ||||||| Sbjct 81496 ATTCAAAAGGAATCTACCCTTCATCTTGTTCTCAGGCTGAGAGGAGG 81542 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| | ||||||||||| || ||| | ||| ||| ||| Sbjct 80654 ATGCAAATCTTTGTGAAAACCCTTACTGGCAAGACTATCACCCTTGAAGTAGAGCCCTCT 80713 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||||| ||| | || || || || || || ||||| | || ||||| Sbjct 80714 GATTCAATTGAGAATGTAAAGGCTAAGATCCAGGATAAGGAAGGTATCCCTCCAGATCAG 80773 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 |||||| | || | ||| ||||||||||||||||| ||| || || ||||| Sbjct 80774 CAAAGGTTGATCTTTGCCGGCAAACAATTAGAAGACGGCCGCACTTTGTCAGACTACAAT 80833 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || |||||||||||||| || ||| | || | ||| | ||||||| Sbjct 80834 ATCCAAAAAGAATCTACCCTTCATCTTGTCCTCAGGCTGAGAGGAGG 80880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402230262181472